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Domain assignment for NP_001041172.1.50509 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001041172.1.50509
Domain Number 1 Region: 166-392
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 2.02e-43
Family Nuclear receptor ligand-binding domain 0.01
Further Details:      
 
Domain Number 2 Region: 12-92
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 4.48e-24
Family Nuclear receptor 0.0032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) NP_001041172.1.50509
Sequence length 396
Comment Nuclear Hormone Receptor family [Caenorhabditis elegans]; AA=GCF_000002985.6; RF=reference genome; TAX=6239; STAX=6239; NAME=Caenorhabditis elegans; strain=Bristol N2; AL=Complete Genome; RT=Major
Sequence
MNQVSTSTSPFCCRICDQRAHGNHFGVISCRACAAFFRRTASGKWDNQKCRGGSCDKKTY
YCKPCRLQKCRDMGMDTTKFQFNRDNIPTAGQFQLPPQTFEAYVGRPEFLLFCDTDAPNS
KVLIDVRYLLEEAGRLLNNGIITPIWAENQLKKLTQGFKHIKLDTDNIKKVETADQKEFM
EMWEYYFITVTKWLMYFDEFQKLNRQIQMTMLQAIWHVFSKLHKYVATSAYQKATPRAKP
TEVIIKDVMMDIETVNFDCSWMSDYPTKDVFKFLSAQACKEMDIVGTLHELDPTDLEITY
LFAQLCFEYVGKRYQGDILRVAEQFQEILANDLHHYYVEEMNRPRYFQRLARLLKVNNAI
QRAIWESRPKMELGRVFNVLKIEFSHPEMFEDSGYY
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Identical sequences H2L0M9
T27B7.6a T27B7.6a T27B7.6a NP_001041172.1.50509 6239.T27B7.6a T27B7.6

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