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Domain assignment for NP_001070152.1.87134 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001070152.1.87134
Domain Number 1 Region: 245-345
Classification Level Classification E-value
Superfamily HMG-box 6.41e-24
Family HMG-box 0.00000155
Further Details:      
 
Domain Number 2 Region: 518-616
Classification Level Classification E-value
Superfamily HMG-box 2.09e-22
Family HMG-box 0.00000378
Further Details:      
 
Domain Number 3 Region: 103-185
Classification Level Classification E-value
Superfamily HMG-box 2.36e-21
Family HMG-box 0.00000347
Further Details:      
 
Domain Number 4 Region: 355-432
Classification Level Classification E-value
Superfamily HMG-box 6.68e-17
Family HMG-box 0.00000966
Further Details:      
 
Domain Number 5 Region: 443-522
Classification Level Classification E-value
Superfamily HMG-box 0.00000000000000144
Family HMG-box 0.00000536
Further Details:      
 
Weak hits

Sequence:  NP_001070152.1.87134
Domain Number - Region: 635-662
Classification Level Classification E-value
Superfamily ARM repeat 0.0138
Family GUN4-associated domain 0.076
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) NP_001070152.1.87134
Sequence length 727
Comment nucleolar transcription factor 1 isoform b [Homo sapiens]; AA=GCF_000306695.2; RF=na; TAX=9606; STAX=9606; NAME=Homo sapiens; AL=Chromosome; RT=Major
Sequence
MNGEADCPTDLEMAAPKGQDRWSQEDMLTLLECMKNNLPSNDSSKFKTTESHMDWEKVAF
KDFSGDMCKLKWVEISNEVRKFRTLTELILDAQEHVKNPYKGKKLKKHPDFPKKPLTPYF
RFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFR
EDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVRPDEIMRDYIQKHPELNISEEGI
TKSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQ
KEKDAYHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQATSPASKKPAQ
EGGKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK
AREAALKAQSERKPGGEREERGKLPESPKRAEEIWQQSVIGDYLARFKNDRVKALKAMEM
TWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQGEPKKPPMNGYQK
FSQELLSNGELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQKQYKVHLDLWVKSL
SPQDRAAYKEYISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDD
ENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGD
SSDSDSN
Download sequence
Identical sequences A0A2K5K9L5 A0A2K5WWD0 A0A2K5Y323 A0A2K6E0X6 A0A2K6N3A8 A0A2K6PX98 G3RUE2 H9FZB2 K7CPC0 K7ESR7
gi|115529449|ref|NP_001070152.1| gi|115529451|ref|NP_001070151.1| ENSPPYP00000023584 NP_001070151.1.87134 NP_001070151.1.92137 NP_001070152.1.87134 NP_001070152.1.92137 XP_002827485.1.23681 XP_002827486.1.23681 XP_003805915.1.60992 XP_004041603.1.27298 XP_004041604.1.27298 XP_005584468.1.63531 XP_008010625.1.81039 XP_008010626.1.81039 XP_009249943.1.23681 XP_010352265.1.97406 XP_011718165.1.29376 XP_011718174.1.29376 XP_011718182.1.29376 XP_011795480.1.43180 XP_011841297.1.47321 XP_014975332.1.72884 XP_014975333.1.72884 XP_015294089.1.63531 XP_016787172.1.37143 XP_016787173.1.37143 XP_016880492.1.92137 XP_016880493.1.92137 XP_017731533.1.44346 ENSP00000345297 ENSP00000377231 ENSP00000432925 ENSP00000437180 ENSP00000345297 ENSP00000377231 ENSP00000432925 ENSP00000437180

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