SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for NP_001085597.1.7800 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  NP_001085597.1.7800
Domain Number 1 Region: 1-96
Classification Level Classification E-value
Superfamily Thioredoxin-like 1.69e-16
Family SH3BGR (SH3-binding, glutamic acid-rich protein-like) 0.0031
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) NP_001085597.1.7800
Sequence length 189
Comment SH3 domain binding glutamate-rich protein L homeolog [Xenopus laevis]; AA=GCF_001663975.1; RF=representative genome; TAX=8355; STAX=8355; NAME=Xenopus laevis; strain=J; AL=Chromosome; RT=Major
Sequence
MVIKVFVATVAGSTAIKKKQQEVVGFLEANRIDFEQKDIACNDDNRQWMRENVPGEKKPE
NGIPLPPQIFNEEQYCGDFESFFDAKEGNEIFVFLGLTPPASKKDMEVPSDLHNGEVPVE
DNTEVTVPVVSPNEEVPAEEVTKSEVPTDVQNETVPAEESSISESPPKKEEEAEEEEVQE
EVEEEVEQE
Download sequence
Identical sequences Q6GPW0
NP_001085597.1.7800 gi|148231348|ref|NP_001085597| gi|49115656|gb|AAH72997|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]