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Domain assignment for NP_001092938.1.4139 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001092938.1.4139
Domain Number 1 Region: 51-507
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 1.18e-105
Family L-arabinose binding protein-like 0.0042
Further Details:      
 
Weak hits

Sequence:  NP_001092938.1.4139
Domain Number - Region: 513-563
Classification Level Classification E-value
Superfamily TNF receptor-like 0.00377
Family TNF receptor-like 0.025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) NP_001092938.1.4139
Sequence length 849
Comment vomeronasal 2 receptor 69 precursor [Rattus norvegicus]; AA=GCF_000002265.2; RF=na; TAX=10116; STAX=10116; NAME=Rattus norvegicus; strain=BN; Sprague-Dawley; AL=Chromosome; RT=Major
Sequence
MKKLCAFTVSFLFLKFSLILCSFTELSCFWRMKNSEDSDGDLRSDCGFVLLTTKKNIEDF
YNDINEVRIPARRYEFFLVMFFATDEINNNPYLLPNISLIFSIIAGLCEDTLGVLDEIYS
QQNNSWNIVNYICEKGQRCDIELTGPSWKASVKLSIHSMIPSVRMCDTGCVFFGPFNPNL
SDHDQFPYMYQIATKDTCLSHGMVSLILHFRWNWLGLVISDDDQGIQFLSDLREEMQSHG
ICLAFVNMIPETMQVYMIKAKIYDKQIMTSSAKVVIIYGEMNSTLEVSFRRWSYLGVQRI
WITTSQWDVITIKKDFNLDFFHGTLTFAHHKVEVAKFRNFMQTRNPAKYPVKFFESVLGW
NYFNCSISKNSNLMDHFIFNNTLEWIALNKYDMVLSEEGYNLYNAVYAVAHTYHELILQQ
TESQNIAEPNGVFIDCQQVASLLKTRVFTNPVGELVNMKHREKQCVEYDIFITWNFPEGL
GLKVKIGSYFPCFPQSQQLHISEDLEWATGGTSVPSSMCSATCTAGFRKIHQKQTADCCF
DCVQCPENEVSNETADMEQCVRCPDDMYANLEQTQCLQRTVSFLAYDDPLGIALGCMALS
FSAITILVLVTFVKYKDTPIVKANNRILSYILLISLVFCFLCSLLFIGHPNQATCILQQT
TFGVFFTVAISTVLAKTITVVMAFKLTTPGRRLRGMMITWASNFVIPFCTLIQLVLCGIW
LVTSPPFIDRDIQSEHGKTIIICNKGSVIAFHVVLGYLGSLALGSFTIAFLARNLPDRFN
EAKFLTFSMLVFYSVWITFLPVYHSTRGKVMVVVEVFSILASSADLLGCIFVQKCYIILV
SSNSNFLHK
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Identical sequences D3ZXT3
ENSRNOP00000044230 10116.ENSRNOP00000044230 NP_001092938.1.100692 NP_001092938.1.4139 ENSRNOP00000044230

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