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Domain assignment for NP_001092947.1.100692 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001092947.1.100692
Domain Number 1 Region: 53-501
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 2.22e-109
Family L-arabinose binding protein-like 0.0039
Further Details:      
 
Weak hits

Sequence:  NP_001092947.1.100692
Domain Number - Region: 504-557
Classification Level Classification E-value
Superfamily TNF receptor-like 0.00353
Family TNF receptor-like 0.022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) NP_001092947.1.100692
Sequence length 843
Comment vomeronasal 2 receptor 70 precursor [Rattus norvegicus]; AA=GCF_000001895.5; RF=representative genome; TAX=10116; STAX=10116; NAME=Rattus norvegicus; strain=mixed; AL=Chromosome; RT=Major
Sequence
MKKLCAFTIAFLILKFSLILFHLTEPSCFWRIKNSEETDGDLRSDCGFVLFTFEEPIEEN
FYNQLINFRISARKYEFFLVMFFATDEINKNPYLLPNMSLIFSLGDRMCKDTLGVLDQIY
SQKNHSWHFINYVCGLERRCDIGLTGPSWTTSLKLAMDSRTPKVFFGPLNSNLRDHEQFP
YVHQIAIKDTRLPHGMVSLMLQFGWTWVGLIISDNDQGIQFLSDLREEMQRHGICLAFVN
MIPETMQIYMTKAKIYDQQLITSSAKVVIIYGEMNSTLEVSFRRWAYLGEQRIWVTNSQW
DVIINKTDFSLDFFHGTVTFAHHHSGMTIFRNVMQTISTSKYPVDISQSMLGWNHFNCSI
SDNRHSKMDHFTFNNTLEWLALHKFDMVLSEEGYNLYNAVYAVAHTYHELILQQVESQKV
SKHKGLFTDCQQVASLLKTRVFTNPVGELVNMNHRENQCAEYDIFIIWNFPQGLGLKVKI
ASYFPCFPHDQQLRISEDLEWATEGTLVSSSMCSVTCIAGFRKIHQKQTADCCFDCVQCP
ENEVSNETADMEQCARCPDDKYANSEQTYCLQRAVTYLAYEDSLGMALGCMALFFSVTTI
LVLVTFVKYKDTPIVKANNRILSYILLISLIFCFLCSLLFIGHPNKATCILQQITFGVFF
SVAVSAVLAKTVTVVMAFKLTTPGRRMRGMLALGAPNLVIPICTLIQLVLCGIWLVISPP
FIDRDIQSEHGKTIIICNKGSVIAFHFTLGYLGTLALMSFAVAFLARKLPDRFNEAKFLT
FSMLVFYSVWITFLPVYHSTRGKVMVVVEVFSILASSAGLLGCIFVPKCYVILVRPDLNF
LQK
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Identical sequences M0R9Q3
ENSRNOP00000044599 NP_001092947.1.100692 NP_001092947.1.4139 10116.ENSRNOP00000044599

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