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Domain assignment for NP_001093841.1.59421 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001093841.1.59421
Domain Number 1 Region: 190-302
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 4.84e-16
Family Spermadhesin, CUB domain 0.0042
Further Details:      
 
Domain Number 2 Region: 397-434
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000223
Family LDL receptor-like module 0.00081
Further Details:      
 
Domain Number 3 Region: 138-175
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000089
Family LDL receptor-like module 0.0017
Further Details:      
 
Domain Number 4 Region: 33-135
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 0.0000000183
Family Spermadhesin, CUB domain 0.003
Further Details:      
 
Domain Number 5 Region: 328-352
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000956
Family LDL receptor-like module 0.0029
Further Details:      
 
Weak hits

Sequence:  NP_001093841.1.59421
Domain Number - Region: 354-396
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0034
Family LDL receptor-like module 0.003
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) NP_001093841.1.59421
Sequence length 712
Comment low-density lipoprotein receptor-related protein 10 precursor [Bos taurus]; AA=GCF_000003205.7; RF=na; TAX=9913; STAX=9913; NAME=Bos taurus; breed=Hereford; AL=Chromosome; RT=Major
Sequence
MLPAILLLFLGGTVAHPDRIIFPNPACEDPPAVLLEVQGTLQRPVGRDSRSSPANCTWLI
LGRKEQTVTVRFQKLHLACGSERLTLRSPIQPQISLCEAPASPLQLPGGNVTITYSYVGA
RAPMGQGFLLSYSQDWLMCLQEEFQCLNHRCVPLLQRCDGVDACGDGSDEAGCSSDPFPD
LALAPVLTPPCNHTLEDFYGVFSSFGYSHLASVSHPQSCRWLLDPRDGRRLAVRFTALDL
GYDDAVRVYDGAGPLETLRLLRSLTRFSNGKAVTVETLSGQATVDYRTVPWSTGRGFNAT
YHVRGYCLPWDRPCGLSSGLGASEGLGERCYSEAQRCDGSWDCADGTDEENCPSCPPGHY
PCGAAGTPGATACYLPTDRCNYQTFCADGADERRCRHCQPGNFRCRDEKCVYETWVCDGQ
PDCADGSDEWDCSYALPRKVITAAVIGSLVCGLLLVIALGCTCKLYAIRTQEYSIFAPLS
RMEAEIVQQQAPPSYGQLIAQGAIPPVEDFPTENPNDNSVLGNLRSLLQILRQDMTPGST
SGARRRQRGRSMRRLVRRLRRWGLLPRTNPPARTPETRSQATPSTAPPETLDGSTGPAHE
GGAVGGQDGDQAPPLPVKAPLPPASTSPACPTVPEAPGPLPAVPLEPSLLSGVVQALRGR
LLPSLRPPGPTRASPGPHTTVLSPEDEDDVLLVPLAEPGVWVVEAEDEPLLA
Download sequence
Identical sequences A6QPB1
NP_001093841.1.59421 NP_001093841.1.76553 ENSBTAP00000021782 ENSBTAP00000021782

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