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Domain assignment for NP_001094020.1.100692 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  NP_001094020.1.100692
Domain Number - Region: 114-136
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0238
Family Retrovirus zinc finger-like domains 0.005
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) NP_001094020.1.100692
Sequence length 586
Comment pre-mRNA-splicing factor SLU7 [Rattus norvegicus]; AA=GCF_000001895.5; RF=representative genome; TAX=10116; STAX=10116; NAME=Rattus norvegicus; strain=mixed; AL=Chromosome; RT=Major
Sequence
MSAAAVDPVSATPMTGSKEMNLEEPKKMTREDWRKKKELEEQRKLGNAPAEVDEEGKDIN
PHIPQYISSVPWYIDPSKRPTLKHQRPQPEKQKQFSSSGEWYKRGVKENSITTKYRKGAC
ENCGAMTHKRKDCFERPRRVGAKFTGTNIAPDEHIQPQLMFDYDGKRDRWNGYNPEEHMK
IVEEYAKVDLAKRTLKAQKLQEELASGKLVEQANSPKHQWGEEEPNSQMEKDHNSEDEDE
DKYADDIDMPGQNFDSKRRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPYANA
GKNPDEVSYAGDNFVRYTGDTISMAQTQLFAWEAYDKGSEVHLQADPTKLELLYKSFKVK
KEDFKEQQKESILEKYGGQEHLDAPPAELLLAQTEDYVEYSRHGTVIKGQERAVACSKYE
EDVKINNHTHIWGSYWKEGRWGYKCCHSFFKYSYCTGEAGKESVNSEECIINDATGEEPV
KKPQTLMELHQEKLKEEKKKKKKKKKHRKSSSDSDDDEERKQEKLKKALNAEEARLLHVK
EIMQVDERKRPYNSIYETREPTEEEMEAYRMKRQRPDDPMASFLGQ
Download sequence
Identical sequences B0BNL0 Q80ZG5
ENSRNOP00000005132 ENSRNOP00000005132 NP_001094020.1.100692 NP_001094020.1.4139 XP_008765864.1.100692 10116.ENSRNOP00000005132

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