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Domain assignment for NP_001101623.1.4139 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001101623.1.4139
Domain Number 1 Region: 62-494
Classification Level Classification E-value
Superfamily Sema domain 2.75e-112
Family Sema domain 0.00000224
Further Details:      
 
Domain Number 2 Region: 491-532
Classification Level Classification E-value
Superfamily Plexin repeat 0.000000000262
Family Plexin repeat 0.0017
Further Details:      
 
Domain Number 3 Region: 551-620
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000329
Family I set domains 0.057
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) NP_001101623.1.4139
Sequence length 666
Comment semaphorin-7A precursor [Rattus norvegicus]; AA=GCF_000002265.2; RF=na; TAX=10116; STAX=10116; NAME=Rattus norvegicus; strain=BN; Sprague-Dawley; AL=Chromosome; RT=Major
Sequence
MTPPPPGRAAPSAPRARVLSLPARFGLPLRLRLLLVFWVTAASAQGHSRSGPRISAVWKG
QDHVDFGQPEPHNVLFHEPGSFSVWVGGRGKVYLFNFPEGKNASVRTVNIGSTKGSCQDK
QDCENYITLLERRGNGLLVCGTNARKPSCWNLVNDSVVMSLGEMKGYAPFSPDENSLVLF
EGDEVYSTIRKQEYNGKIPRFRRIRGESELYTSDTVMQNPQFIKATIVHQDQAYDDKIYY
FFREDNPDKNPEAPLNVSRVAQLCRGDQGGESSLSVSKWNTFLKAMLVCSDAATNRNFNR
LQDVFLLPDPSGQWRDTRVYGVFSNPWNYSAVCVYSLGDIDRVFRTSSLKGYHMGLPNPR
PGMCLPKKQPIPTETFQVADSHPEVAQRVEPMGPLKTPLFHSKYHYQKVVVHRMQASNGE
TFHVLYLTTDRGTIHKVVESGDQEHSFVFNIMEIQPFHRAAAIQAISLDADRRKLYVTSP
WEVSQVPLDMCGVYSGGCHGCLMSRDPYCGWDQDQDRCVSIYSSQRSVLQSINPAEPHRE
CPNPNPDEAPLQKVSLARNSRYYLTCPMESRHATYLWRHEENVEQSCEPGHQSPSCILFI
ENLTARQYGHYRCEAQEGSYLHEAQHWELLPEDRALAEQLLGHARALAASFWLGVLPTLV
LGLLVH
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Identical sequences D3ZQP6
ENSRNOP00000010620 10116.ENSRNOP00000010620 NYSGRC-IgSF-ENSRNOP00000010620 NP_001101623.1.100692 NP_001101623.1.4139 ENSRNOP00000010620

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