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Domain assignment for NP_001102669.1.4139 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001102669.1.4139
Domain Number 1 Region: 359-526,702-838
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 8.55e-39
Family Tandem AAA-ATPase domain 0.0011
Further Details:      
 
Domain Number 2 Region: 117-199
Classification Level Classification E-value
Superfamily DEATH domain 0.000000212
Family Caspase recruitment domain, CARD 0.025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) NP_001102669.1.4139
Sequence length 1027
Comment interferon-induced helicase C domain-containing protein 1 [Rattus norvegicus]; AA=GCF_000002265.2; RF=na; TAX=10116; STAX=10116; NAME=Rattus norvegicus; strain=BN; Sprague-Dawley; AL=Chromosome; RT=Major
Sequence
MSTVCSAEDSFRNLISIFRPRVKMNIQVEPVLDYLVFLPAETKEQILRKVTTCGNTSAAE
LLLSTLEQGQWPLGWTQMFVEALEHSGNPLAARYVKPSLTDLPSPSSETAHDECLHLLNL
LQPTLVGKLLINDVLDTCSEKGLVTVEDRNRISAAGNSGNESGVRELLRRIVQKENWFST
FLDVLRQTGNDALVQELTGVSCPEESTDLDNASHKDRPAANEPLLPAIDALSLETEAWTI
EDTSPEASFADSSVTTESDTSLAEGSVSCFDESLGHNSNMGRDSGTMGSDSDEDTIMGTK
RASPKPELQLRPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQACESGK
VIVLVNKVMLAEQLFRKEFNPFLKKWYRIIGLSGDTQLKISFPEVVKSYDVIISTAQILE
NSLLNLESGEDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLKNHKLKKQNKPT
IHLPQILGLTASPGVGAAKKQSEAEKHILNICANLDAFTIKTVKENLSQLKHQIKEPCKK
FVIADDTRENPFKEKLLEIMASIQTYCQKSPLSDFGTQHYEQWAIQMEKKAAKDGNRRDR
VCAEHLRKYNEALQINDTIRMIDAYSHLETFYTDEKEKKFAALNDSDESDDDEASSCHDQ
LKGNVKKSLKLDETDEFLMNLFFDNKKMLKKLAENPKYENEKLIKLRNTILEQFTRSEES
SRGIIFTKTRQSTYALSQWIMENEKFAEVGVKAHHLIGAGHSSEVKPMTQTEQKEVISKF
RTGEINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVTSSGS
GVTEREIVNDFREKMMYKAINRVQNMKPEEYAHKILELQVQSILEKKMKVKRSIARQYNS
DPSLITLLCKNCSTLVCSGENIHVIEKMHHVNMTPEFKGLYIVRENKALQMKFADYQTNG
EIICKCGQAWGTMMVHKGLDLPCLKIRNFVVNFKNNSSKKQYKKWVELPIRFPDLDCSEY
CLYSDED
Download sequence
Identical sequences G3V6W5
10116.ENSRNOP00000009621 NP_001102669.1.100692 NP_001102669.1.4139 ENSRNOP00000009621 ENSRNOP00000048985

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