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Domain assignment for NP_001120908.1.99540 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001120908.1.99540
Domain Number 1 Region: 27-517
Classification Level Classification E-value
Superfamily Sema domain 1.96e-181
Family Sema domain 0.00000000000778
Further Details:      
 
Domain Number 2 Region: 513-564
Classification Level Classification E-value
Superfamily Plexin repeat 0.0000000000384
Family Plexin repeat 0.0021
Further Details:      
 
Domain Number 3 Region: 570-662
Classification Level Classification E-value
Superfamily Immunoglobulin 0.000000385
Family I set domains 0.037
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) NP_001120908.1.99540
Sequence length 773
Comment semaphorin-3B precursor [Xenopus tropicalis]; AA=GCF_000004195.3; RF=representative genome; TAX=8364; STAX=8364; NAME=Xenopus tropicalis; strain=Nigerian; AL=Chromosome; RT=Major
Sequence
MKLQRSLLSLCLLLYFGLIGSNKVTPRLKLSYQDLMSLHGLRTFTLERSCCYDALFLDEE
RGRLFVGGKNYLMSLSLDNISKQELAIHWPAPVEWREECNWAGKDINVDCMNYVKILQPY
NRTHLFTCGTGAFHPTCGFVHVGQRTDDTVFKMDLRRMEDGKGRCPYDPKHIAAAVLVGD
ELYSGVATDLMGRDFTIFRSLGRRPPLRTEQHDSRWLNEPKFVKVFWIPESENPDDDKIY
FFFKETPVEGAGGVKQSYARIGQICRNDLGGQRSLVNKWTTFLKARLVCSVPGNEIGGDT
HFDELRDVFLLQTRDRRNPLIYALFSTSSSVFRGSAICVYTMNDVRRAFLGPFAHKEGPN
YQWVSYQGKVPYPRPGMCPSKTFGSFESTKSFPDDVLQFARNHPLMFNPVVPGSGRPVFL
RSHGDLSFTQLAVDRVAAADGEYDVMFIGTDVGSVLKVISVPKQSWHHVEQVVLEELQVF
KNASPITTMQISSKRQQIYVGSASGISQLPLHRCGIYGKACAECCLARDPYCAWDGASCT
RFLPNTKRRSRRQDVRNGDPNTLCSGEQQRFSVQEKRLLGVEGSSIFLECLPKSLRAQVT
WTYQKAPESSRTEVQFDERVLQTDRGIVVRNVLRRDAGTFICYSSEHGFTQTLLRLHLEV
IPSSRTEEHLGLQRVPHNRWYQDFMRLVQQPGSVEQMCEEIWTRKGRTSHPPGPQGAPHV
PGSQGRSLPAVPPLNIKTKAQKWKHLEDKRKVRSRRTHEQLSRAERGPRSAPS
Download sequence
Identical sequences B2GU89
NP_001120908.1.99540 gi|183986447|gb|AAI66183| gi|188528965|ref|NP_001120908|

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