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Domain assignment for NP_001122852.1.50509 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001122852.1.50509
Domain Number 1 Region: 131-371
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 2.88e-41
Family Nuclear receptor ligand-binding domain 0.0032
Further Details:      
 
Domain Number 2 Region: 12-88
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 2.34e-23
Family Nuclear receptor 0.0016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) NP_001122852.1.50509
Sequence length 377
Comment Nuclear Hormone Receptor family [Caenorhabditis elegans]; AA=GCF_000002985.6; RF=reference genome; TAX=6239; STAX=6239; NAME=Caenorhabditis elegans; strain=Bristol N2; AL=Complete Genome; RT=Major
Sequence
MSGTTISSDRPNICAICHQKAFGYNYEVVSCNACKMFFRRAHAEKIDDFCKKGGKCFDGD
DLLTSRPKCRSCRYKKCVNLGMRYHNSSESQTQSDEEPSPKQSVVAVVPQHIITQAHIDS
TFFQHLHALNETRYNAYCVINICEDPSFCDLVAQGSKLSVYLRPQEIEWENTERKLKPWG
SLGVLLAVEVCKGLSFYNDLLLSDRVLLLKNVAFKSHHLSVAYDSFIQKKGRVLAPTGTE
MFPDVLFEIPKCREIIMDLLTSPMKPLMELQITESEYLLLNMIVICNPDIDGLSPRGREI
ISENRQKCVQLLLQQCLLHYSSKGPGRLLELLAISNHLNKQIYITQQFFSVSKRHWNPFF
YIPRILVESCKLERKLF
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Identical sequences B1GRK4
NP_001122852.1.50509 C17E7.8b C17E7.8b C17E7.8b 6239.C17E7.8b

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