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Domain assignment for NP_001135520.1.99540 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001135520.1.99540
Domain Number 1 Region: 49-155
Classification Level Classification E-value
Superfamily SRCR-like 8.89e-37
Family Scavenger receptor cysteine-rich (SRCR) domain 0.00023
Further Details:      
 
Domain Number 2 Region: 317-418
Classification Level Classification E-value
Superfamily SRCR-like 2.62e-34
Family Scavenger receptor cysteine-rich (SRCR) domain 0.00017
Further Details:      
 
Domain Number 3 Region: 427-543
Classification Level Classification E-value
Superfamily SRCR-like 3.4e-26
Family Scavenger receptor cysteine-rich (SRCR) domain 0.0011
Further Details:      
 
Domain Number 4 Region: 195-296
Classification Level Classification E-value
Superfamily SRCR-like 2.22e-22
Family Scavenger receptor cysteine-rich (SRCR) domain 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) NP_001135520.1.99540
Sequence length 767
Comment lysyl oxidase homolog 2 precursor [Xenopus tropicalis]; AA=GCF_000004195.3; RF=representative genome; TAX=8364; STAX=8364; NAME=Xenopus tropicalis; strain=Nigerian; AL=Chromosome; RT=Major
Sequence
MLVTHIFLLTLSLSVPTLGQYEHWLYYPEYQASQAPEPLPTPARNVPQIHVRLAGEKRKH
NEGRVEVYYEGEWGTVCDDDFSMYAAHIVCRELGYQDAVSWSPSSKYGKGEGRIWLDNVN
CNGREKSIASCGSNGWGVTDCKHSEDVGVQCSDRRIPGFKVSNELPGQLEGLNIQVEEVR
IRAILSAYRKRVPVTEGFVEVKVQGSWRQVCNAEWSSKNSRVVCGMFGFPAEKKFNNKVY
KLFSSRRKHTYWQFSANCTGNEAHLSSCKVGGVLTPDPKTNQTCSDGSPAVVSCTPGRAF
APSPGTGFRKAFRQEQPLVRLRGGANTGEGRVEVLKNGEWGTICDDKWNLVTASVVCREL
GFGSAKEALAGAQMGQGMGHIHMSEIQCNGFEKSLIDCKFNVHSQGCNHEEDAAVRCNVP
AMGFENQVRLSGGRHPTEGRVEVLMERNGTLRWGTVCSDTWGTMEAMIVCRQLGLGFASH
AFQETWYWQGDINADDVVMSGVKCSGTEMSLAHCRHDGANINCPRGGGRFAAGVSCVETA
PDLVLNAALVEQTTYLEDRPMFMLQCAHEEQCLSSSADRTSPTTGYRRLLRFSSQIHNNG
QADFRPKTGRHSWIWHDCHRHYHSMEVFTHYDLLSLNGTKVAEGHKASFCLEDSECETDV
QKQYACANFGEQGITVGCWDVYRHDIDCQWVDITDVAPGDYFFQVIINPNQEVAESDYTN
NIMKCRCRYDGHRIWMYNCHIGGSYSTETEEKFEHFSGLMNNQLSTR
Download sequence
Identical sequences gi|195539762|gb|AAI67947| gi|213982721|ref|NP_001135520| NP_001135520.1.99540

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