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Domain assignment for NP_001161143.1.87134 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001161143.1.87134
Domain Number 1 Region: 444-505
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.0000000000000212
Family LIM domain 0.0028
Further Details:      
 
Domain Number 2 Region: 502-572
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.000000000000389
Family LIM domain 0.0025
Further Details:      
 
Domain Number 3 Region: 416-442
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.000000000186
Family LIM domain 0.0092
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) NP_001161143.1.87134
Sequence length 612
Comment lipoma-preferred partner isoform a [Homo sapiens]; AA=GCF_000306695.2; RF=na; TAX=9606; STAX=9606; NAME=Homo sapiens; AL=Chromosome; RT=Major
Sequence
MSHPSWLPPKSTGEPLGHVPARMETTHSFGNPSISVSTQQPPKKFAPVVAPKPKYNPYKQ
PGGEGDFLPPPPPPLDDSSALPSISGNFPPPPPLDEEAFKVQGNPGGKTLEERRSSLDAE
IDSLTSILADLECSSPYKPRPPQSSTGSTASPPVSTPVTGHKRMVIPNQPPLTATKKSTL
KPQPAPQAGPIPVAPIGTLKPQPQPVPASYTTASTSSRPTFNVQVKSAQPSPHYMAAPSS
GQIYGSGPQGYNTQPVPVSGQCPPPSTRGGMDYAYIPPPGLQPEPGYGYAPNQGRYYEGY
YAAGPGYGGRNDSDPTYGQQGHPNTWKREPGYTPPGAGNQNPPGMYPVTGPKKTYITDPV
SAPCAPPLQPKGGHSGQLGPSSVAPSFRPEDELEHLTKKMLYDMENPPADEYFGRCARCG
ENVVGEGTGCTAMDQVFHVDCFTCIICNNKLRGQPFYAVEKKAYCEPCYINTLEQCNVCS
KPIMERILRATGKAYHPHCFTCVMCHRSLDGIPFTVDAGGLIHCIEDFHKKFAPRCSVCK
EPIMPAPGQEETVRIVALDRDFHVHCYRCEDCGGLLSEGDNQGCYPLDGHILCKTCNSAR
IRVLTAKASTDL
Download sequence
Identical sequences G3RKK7 K7AYG5 Q93052
NP_001161143.1.87134 NP_001161143.1.92137 NP_005569.1.87134 NP_005569.1.92137 XP_005247503.1.92137 XP_005247507.1.92137 XP_005247508.1.92137 XP_005247510.1.92137 XP_011511122.1.92137 XP_011511129.1.92137 XP_011511130.1.92137 XP_011511133.1.92137 XP_011511135.1.92137 XP_011511136.1.92137 XP_016861866.1.92137 XP_016861867.1.92137 XP_016861868.1.92137 XP_016861869.1.92137 XP_018879493.1.27298 gi|264681524|ref|NP_001161143.1| gi|5031887|ref|NP_005569.1| 9606.ENSP00000318089 ENSP00000478901 ENSP00000482472 ENSP00000318089 ENSP00000438891 ENSGGOP00000016276 ENSP00000404679 ENSGGOP00000016276

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