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Domain assignment for NP_001179562.1.59421 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001179562.1.59421
Domain Number 1 Region: 217-274
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.65e-19
Family Classic zinc finger, C2H2 0.01
Further Details:      
 
Domain Number 2 Region: 180-220
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000446
Family Classic zinc finger, C2H2 0.073
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) NP_001179562.1.59421
Sequence length 291
Comment zinc finger protein SNAI3 [Bos taurus]; AA=GCF_000003205.7; RF=na; TAX=9913; STAX=9913; NAME=Bos taurus; breed=Hereford; AL=Chromosome; RT=Major
Sequence
MPRSFLVKTHSSHRVPNYGQLETQRDTSGACAACGGLVVPFVLPDKAAPSTSGDPPQPWD
FTSVVAHVSLPLPTFLGNEEAGRALGPGPLEVSLEDPRAGRAPSAPLRDSVNHLNLPPLL
ALPTRWPSILNADGAQAPGCCLPGAERAPCSPGGFPCHRPFHAPAALAGHQQLHCHLQAQ
RCFTCKFCDKEYGSLGALKMHIRTHTLPCLCAICGKAFSRPWLLQGHLRTHTGEKPYTCP
HCSRAFADRSNLRAHLQTHSDTKKYRCKRCAKTFSRMALLARHEEAGCCAP
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Identical sequences E1BH01
ENSBTAP00000023305 NP_001179562.1.59421 NP_001179562.1.76553 XP_005218680.1.76553 9913.ENSBTAP00000023305 ENSBTAP00000023305

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