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Domain assignment for NP_001179939.1.59421 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001179939.1.59421
Domain Number 1 Region: 573-623
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000000389
Family Classic zinc finger, C2H2 0.01
Further Details:      
 
Domain Number 2 Region: 610-657
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000135
Family Classic zinc finger, C2H2 0.016
Further Details:      
 
Domain Number 3 Region: 90-120
Classification Level Classification E-value
Superfamily SET domain 0.00000837
Family Histone lysine methyltransferases 0.057
Further Details:      
 
Domain Number 4 Region: 132-160
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000771
Family C2HC finger 0.079
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) NP_001179939.1.59421
Sequence length 707
Comment PR domain zinc finger protein 13 [Bos taurus]; AA=GCF_000003205.7; RF=na; TAX=9913; STAX=9913; NAME=Bos taurus; breed=Hereford; AL=Chromosome; RT=Major
Sequence
MHGAARAPATSVSADCCIPAGLRLGPVPGTFKLGKYLSDRREPGPKKKVRMVRGELVDES
GGSPLEWIGLIRAARNPQEQTLEAIADLPGGQIFYRALRDVQPGEELTVWYSNSLAQWFD
IPIIATPTHDEKGEERYICWYCWRTFRYPNSLKAHLRFHCVLSSGGGRAYLHHEHAARQG
AAPAADGLRLSPKPPASDFAAAAPASTLRPHPQVPPAPQACGARESIKREASSAPSATSP
TLAKWGPSKKGKEQPDRALDMSGPARGHGHFLGIVGGSPAGGGGLAFYPGVRSAFKPTGL
ARAAAAAHGDPYRDEGGGKPGAGLALSRLLGGGRAGGHPRSGENPAAGGAGHHHHHHAHH
HHHPKCLLAGDPPPPPGLPCSGALRGFPLLSGPPEEASAFKHVERAPPAAADVPGVRYAQ
LPPAAGLPLERCSLPPLDAGGLKGYPGGECSHLPAVMPAFTVYNGELLYGSPAAAAYYPL
KLHFGGLLKYPESISYFSGPAAAAALSPAELGSLASIDREIAMHTQQLSEMAAGKGRSRL
DAGTLPPAVVAAGGAGGGGSGGGSGAGKPKTGHLCLYCGKLYSRKYGLKIHMRTHTGYKP
LKCKVCLRPFGDPSNLNKHIRLHAEGNTPYRCEFCGKVLVRRRDLERHVKSRHPGQNLLP
KASDGPGAEPHYPPEPGEPKSDNDSDVDVCFTDDQSDPEAGGGGERD
Download sequence
Identical sequences F1MMF1
ENSBTAP00000008009 NP_001179939.1.59421 NP_001179939.1.76553 ENSBTAP00000008009

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