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Domain assignment for NP_001189372.2.45394 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001189372.2.45394
Domain Number 1 Region: 6-289
Classification Level Classification E-value
Superfamily BAR/IMD domain-like 9.63e-77
Family BAR domain 0.0017
Further Details:      
 
Domain Number 2 Region: 397-574
Classification Level Classification E-value
Superfamily GTPase activation domain, GAP 8.24e-50
Family BCR-homology GTPase activation domain (BH-domain) 0.00000199
Further Details:      
 
Domain Number 3 Region: 263-370
Classification Level Classification E-value
Superfamily PH domain-like 4.79e-16
Family Pleckstrin-homology domain (PH domain) 0.014
Further Details:      
 
Domain Number 4 Region: 824-879
Classification Level Classification E-value
Superfamily SH3-domain 0.000000000000656
Family SH3-domain 0.00016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) NP_001189372.2.45394
Sequence length 880
Comment rho GTPase-activating protein 42 [Danio rerio]; AA=GCF_000002035.6; RF=reference genome; TAX=7955; STAX=7955; NAME=Danio rerio; AL=Chromosome; RT=Major
Sequence
MGLPALEFSDSFLDSPDFRERLKCHEIELDRTNKFIKELIKDGNMLISALKSLSAAVQKF
SQSLQDFQFECIGDAETDDEINIAQSFKEFSQLLNTVEEERRRLIQNADDVLITPLEKFR
KEQIGAAKEGKKKFDKETEKYYTVLEKHLSLSSRKKESLLQEADTQISKERQVFYDASLE
YVFKIQEVQERKKFEFVEPLLAFLQGLFTFYHEGYELAHEFEPYKQQLQFNLQNTRNNFE
STRQEVENLMRRIRSAEQDFKAPGQWTMEGFLYVQEKRPLGCTWTRHYCTYEKGTKMFTM
SNSELKTGGKQNGLIMSPPEMFKLKSCIRRRTDSIDKRFCFDIEVVERHGIITLQSLSES
NRRLWMEAMDGKEPIYTLPALLSKKEETFLNEAGFNFVRKCIESVEARGINTLGLYRIGG
VNSKVQRLMTSVFAAKAPADLDLDPDTWDNKTITSGLKNYLRCLAEPLMTYRLHKDFIMA
VKSDDQNYRVCAVHALVYKLPDKNKEMLNLLIKHLHVVSTHSQKNLMTVSNLGVIFGPTL
MRSQEETVAAMMNIKFQNIVVEILIENYDKIFHQAPDPNVPLPHPQSHSQSRGGARRSKA
ICLSSGSRKSRGLYPPALCLADADSDTFSSSPSSTPMGSMESLSSHSSEQNSCSKTGSPS
RNKHKASGSLCWTTPSPSTNGPKSPACTTSPDSSSKEDANKTDGEWEEALSTSPGDRSSP
ASELLHRTLGETAEDQRSLSSCSSLTSLHISEGFRSCHGSIQSLVSRSQRDSLKSLHMPD
LPPKDGMRFRDDSSASNGYQRPGSVVACRAAIFECPVISQPTTGRDAKALYSCQAEHSHE
LSFPQGAHFSNVYPSVEPGWLQATFDGKTGLIPENYVEYL
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Identical sequences I3ITG1
ENSDARP00000126225 ENSDARP00000126225 NP_001189372.2.45394

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