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Domain assignment for NP_001192798.1.76553 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001192798.1.76553
Domain Number 1 Region: 60-189
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00000000000326
Family Spectrin repeat 0.011
Further Details:      
 
Domain Number 2 Region: 214-327
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00000000144
Family Spectrin repeat 0.0072
Further Details:      
 
Domain Number 3 Region: 602-743
Classification Level Classification E-value
Superfamily Spectrin repeat 0.0000000777
Family Spectrin repeat 0.0077
Further Details:      
 
Domain Number 4 Region: 514-609
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00000396
Family Spectrin repeat 0.014
Further Details:      
 
Domain Number 5 Region: 436-553
Classification Level Classification E-value
Superfamily Spectrin repeat 0.0000705
Family Spectrin repeat 0.014
Further Details:      
 
Weak hits

Sequence:  NP_001192798.1.76553
Domain Number - Region: 798-883
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00683
Family Spectrin repeat 0.0096
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) NP_001192798.1.76553
Sequence length 976
Comment nesprin-3 [Bos taurus]; AA=GCF_000003055.6; RF=representative genome; TAX=9913; STAX=9913; NAME=Bos taurus; breed=Hereford; AL=Chromosome; RT=Minor
Sequence
MTQQPQEGFDRSVEDARRWMRAVQERLQINDNTQGPRTALEARLRETEKICQLEPEGRVK
VDVVLQAAEALLACCHEDQKTEILARLRDIKAQWEETVTHMVHCHSRIEWVWLHWSEYLL
ARDEFYRWFQKMTVALAPPVELQSSLKEKQWQLSHAQVLLRNADHQAVLLDRLLEEAASL
FNRIGDPSVDEDAQQRMKAEYDAVKAKAQDRVDFLEQVTREHECFQASVDEFQLWLKAVV
ERVDGCMGRKCRLSTQDRLLALQGIANDFPKGEESLKRLEEQAVGVTQNTSPLGAEKITR
DLEEMRDVLEKLRGLWEEEQGRLRDLVKSKGACEQQRGQLEAELTEFRKDLQRLAEEGLG
TTAKAATEDELVARWRLYLATREALATEEPRVDRLQAQLKELIVSLQDPKPLSDSVVAAI
QEYQRMKAKSSRLRNAAATELWQRFQRHPQDLQLWRELAQRLLDVTASLPDPPSIHTFLP
QIEAALTESSRLKEQLTMLQLKKDLLGSIFGQERATALLEEVATSVRDRDLLHNRLLQRK
SKLQSLLAQHKDFGATFEPLQKKLSDLQIRVQAENGLRRDLPEKQAQLLRLQGLQEEEMD
LGSQVEAMRPLFQGNPNHQHKMDQLSAAHQALQRSLEDLLEGRQQSLREHCTFNHELLKL
RHWISVITQKLEAHRGDTGPWDAQSQETEVERLLAEFPEKEAQLLEMEALGRLVMEASSL
EGAALVQGELEELTESWRALRQLEESLLSLTRNRQLQRMTEVDSGKKMIFTNNIPKTGFL
ILPTDLTSRHRRQAGLLQGQGGSHEDYSQSLRNFEDWLQEENSKLVRIIAMKTATAEDLR
TRATKLQELEARIPEGQHLFENLLRLRPASESSDELEDLRYRWMLYKSKLKDSSHLLTQS
PLGEPTGFRKAARWRGLSSLCRKVCCVALPLQLLLLLFLLLLFLLPVGEENRSCFLANNF
ARSLTLMLRYDGPPPT
Download sequence
Identical sequences E1BJU6
ENSBTAP00000004584 NP_001192798.1.59421 NP_001192798.1.76553 XP_010815552.1.76553 ENSBTAP00000004584 9913.ENSBTAP00000004584

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