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Domain assignment for NP_001233179.1.46622 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001233179.1.46622
Domain Number 1 Region: 236-456
Classification Level Classification E-value
Superfamily Metalloproteases ("zincins"), catalytic domain 2.84e-57
Family Reprolysin-like 0.00033
Further Details:      
 
Domain Number 2 Region: 546-601
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000000000209
Family TSP-1 type 1 repeat 0.00023
Further Details:      
 
Domain Number 3 Region: 888-944
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000000196
Family TSP-1 type 1 repeat 0.0066
Further Details:      
 
Domain Number 4 Region: 825-884
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000262
Family TSP-1 type 1 repeat 0.0049
Further Details:      
 
Domain Number 5 Region: 939-1002
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000523
Family TSP-1 type 1 repeat 0.0044
Further Details:      
 
Domain Number 6 Region: 1002-1054
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000419
Family TSP-1 type 1 repeat 0.0039
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) NP_001233179.1.46622
Sequence length 1103
Comment A disintegrin and metalloproteinase with thrombospondin motifs 10 precursor [Sus scrofa]; AA=GCF_000003025.6; RF=representative genome; TAX=9823; STAX=9823; NAME=Sus scrofa; breed=Duroc; AL=Chromosome; RT=Major
Sequence
MAPACQILRWALALGLGLAFKVTHTFRSQDEFLSSLESYEIAFPTRVDHNGALLAFSPPP
PRRQRRGTGPQAESRLFYKVAAPSTHFLLNLTRSPRLLAGHVSVEYWTREGLAWQRAARS
HCLYAGHLQGQAGSSHVAISTCGGLHGLIVADEEEYLIEPLQGGPQRHRGPEDSGPHVVY
KRSSLRHPHLDTACGVRDEKPWKGRPWWLRTLKPPPARPLGNETERGQPGLKRSVSRERY
VETLVVADKMMVAYHGRRDVEQYVLAIMNIVAKLFQDSSLGNIVNILVTRLILLTEDQPT
LEITHHAGKSLDSFCKWQKSIVNRSGHGNAIPENGVANHDTAVLITRYDICIYKNKPCGT
LGLAPVGGMCERERSCSINEDIGLATAFTIAHEIGHTFGMNHDGVGNSCGARGQDPAKLM
AAHITMKTNPFVWSSCSRDYITSFLDSGLGLCLNNRPPRQDFVYPTVAPGQAYDADEQCR
FQHGVKSRQCKYGEVCSELWCLSKSNRCITNSIPAAEGTLCQTHTIDKGWCYKRVCVPFG
SRPEGVDGAWGPWTPWGDCSRTCGGGVSSSSRHCDSPRPTIGGKYCLGERRRHRSCNTDD
CPPGSQDFREMQCSEFDSVPFRGKFYTWKTYRGGGVKACSLTCLAEGFNFYTERAAAVVD
GTPCRPDTVDICVSGECKHVGCDRVLGSDVREDKCRVCGGDGSACETIEGVFSPALLGAG
YEDVVWIPKGSVHIFIQDLNLSLSHLALKGDQESLLLEGLPGTPQPHRLPLAGTTFQLRQ
GPDQTQSLEALGPINASLIVMVLARTELPTLRYRFNAPIARDALPPYSWHYAPWTKCSAQ
CAGGSQVQAVECRSQLDSSAVAPHHCSAHSKLPKRQRACNTEPCPPDWVVGNWSRCSRSC
DAGVRSRSVVCQRRVSAAEEKALDDSACPQPRPPVLEACHGPACPPEWAALDWSECTPSC
GPGLRHRVVLCKSADQRATLPPAHCAPAAKPPATMRCNLRRCPPARWVTGEWGECSAQCG
FGQQQRPVRCSSHTGQPSRECAEALRPPATQQCEAKCDSTPAGDSLEECKDVNKVAYCPL
VLKFQFCSRAYFRQMCCKTCHGR
Download sequence
Identical sequences F8UV45
NP_001233179.1.46622 ENSSSCP00000022222 ENSSSCP00000022222

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