SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for NP_001247254.1.81976 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  NP_001247254.1.81976
Domain Number 1 Region: 269-299
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.0000902
Family CCCH zinc finger 0.0059
Further Details:      
 
Weak hits

Sequence:  NP_001247254.1.81976
Domain Number - Region: 627-667
Classification Level Classification E-value
Superfamily RING/U-box 0.000219
Family RING finger domain, C3HC4 0.0059
Further Details:      
 
Domain Number - Region: 76-99
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.0235
Family CCCH zinc finger 0.005
Further Details:      
 
Domain Number - Region: 245-267
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.0353
Family CCCH zinc finger 0.0063
Further Details:      
 
Domain Number - Region: 108-145
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.0589
Family CCCH zinc finger 0.0051
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) NP_001247254.1.81976
Sequence length 672
Comment unkempt, isoform D [Drosophila melanogaster]; AA=GCF_000001215.4; RF=reference genome; TAX=7227; STAX=7227; NAME=Drosophila melanogaster; AL=Chromosome; RT=Major
Sequence
MLANETNKLLLSSQQEKPNHYTYLKEFRVEQCQSFLQHKCNQHRPFVCFNWHFQNQRRRR
PVRKRDGTFNYSADNYCTKYDETTGICPEGDECPYLHRTAGDTERRYHLRYYKTCMCVHD
TDSRGYCVKNGLHCAFAHGMQDQRPPVYDIKELETLQNAESTLDSTNALNALDKERNLMN
EDPKWQDTNYVLANYKTEPCKRPPRLCRQGYACPQYHNSKDKRRSPRKYKYRSTPCPNVK
HGEEWGEPGNCEAGDNCQYCHTRTEQQFHPEIYKSTKCNDVQQAGYCPRSVFCAFAHVEP
CSIDEKTRDHTVYLNELISNAYPDLKAQDAFQRVDNLLNIDGNSTNKMLVDALENTTNFS
KFLSFSRPLDSRSCSMDDPRENSLSASLANTSLLTRSSAPINIPNTTLSNSINDFNSGSF
AVNIPSSSLTYSPTNHANLFNVDAFNYGGSNKLSNSLSATQNDSSLFFPSRIISPGFGDG
LSISPSVRISELNTIRDDINSSSVGNSLFENTLNTAKNAFSLQSLQSQNNSDLGRITNEL
LTKNAQIHKLNGRFEDMACKLKIAELHRDKAKQEAQEWKERYDLAQIQLNLPAELRDLSI
QKLKQLQSKLRTDLEEVDKVLYLENAKKCMKCEENNRTVTLEPCNHLSICNTCAESVTEC
PYCQVPVITTHT
Download sequence
Identical sequences A0A0B4K7D1
NP_001247254.1.81976 FBpp0083795 FBpp0294023

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]