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Domain assignment for NP_001274079.1.87134 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001274079.1.87134
Domain Number 1 Region: 374-655
Classification Level Classification E-value
Superfamily RNI-like 5.89e-37
Family 28-residue LRR 0.045
Further Details:      
 
Domain Number 2 Region: 176-400
Classification Level Classification E-value
Superfamily RNI-like 1.6e-27
Family Cyclin A/CDK2-associated p19, Skp2 0.0043
Further Details:      
 
Weak hits

Sequence:  NP_001274079.1.87134
Domain Number - Region: 155-186
Classification Level Classification E-value
Superfamily F-box domain 0.00144
Family F-box domain 0.0081
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) NP_001274079.1.87134
Sequence length 707
Comment F-box/LRR-repeat protein 13 isoform 3 [Homo sapiens]; AA=GCF_000306695.2; RF=na; TAX=9606; STAX=9606; NAME=Homo sapiens; AL=Chromosome; RT=Major
Sequence
MTPELMIKACSFYTGHLVKTHFCTWRDIARTNENVVLAEKMNRAVTCYNFRLQKSVFHHW
HSYMEDQKEKLKNILLRIQQIIYCHKLTIILTKWRNTARHKSKKKEDELILKHELQLKKW
KNRLILKRAAAEESNFPERSSSEVFLVDETLKCDISLLPERAILQIFFYLSLKDVIICGQ
VNHAWMLMTQLNSLWNAIDFSSVKNVIPDKYIVSTLQRWRLNVLRLNFRGCLLRPKTFRS
VSHCRNLQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQN
LSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMHLTINDM
PTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFRALSACKLRKIRFEGNKRVTDASFKF
IDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGLKQFLDGPASMR
IRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFSLVSIDLSGT
DISNEAFCKSSLILEHLDVSYCSQLSDMIIKALAIYCINLTSLSIAGCPKITDSAMEMLS
AKCHYLHILDISGCVLLTDQILEDLQIGCKQLRILKMQYCTNISKKAAQRMSSKVQQQEY
NTNDPPRWFGYDREGNPVTELDNITSSKGALELTVKKSTYSSEDQAA
Download sequence
Identical sequences ENSP00000368607 NP_001274079.1.87134 NP_001274079.1.92137 ENSP00000368607 ENSP00000377367

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