SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for NP_001287284.1.81976 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  NP_001287284.1.81976
Domain Number 1 Region: 15-295,326-864,900-1012
Classification Level Classification E-value
Superfamily ARM repeat 9.1e-111
Family Armadillo repeat 0.0062
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) NP_001287284.1.81976
Sequence length 1018
Comment Ranbp9, isoform D [Drosophila melanogaster]; AA=GCF_000001215.4; RF=reference genome; TAX=7227; STAX=7227; NAME=Drosophila melanogaster; AL=Chromosome; RT=Major
Sequence
MSLQFQNDCGDSVKQAIIEELQNLLSSDTGVLQQTEKRIKQLEYTEGYGVYLSEIIMNQA
HELPLRQIAIVMLTRYVENHWTDDDDVKRKANGCMASEQAKRTIRNILPNGLYDPNSKIR
SSVAHTISTIAATDYPHCWAELFDIIVKCLGGNEDSIHGAMQVLQDFSYDVEQIKELGPV
VIPEVYRIFDSEQNYSIKTRVSAIRILKPLFASIAALITNKEEQSTMMSSILTNFMDKLM
HYLSMNSGAVSSFLLRTEIIKVFTHLVNEMPKYINPFMDRVLPIVWQLLTQIAETYVKVS
VNQTETSPLASGDSEEDDEQTNFQSLIIQILEFINCILTCNKLRGSIKNVLADLIYITIV
YIQLSEEQLEDWHDDPEKFVDDEDDGGVELTVRMCGRDVLLAINDEFGANAIQPLQEALG
RHFSVADAEKAANNPNWWKIQEACMDAVHAFRDVILAGDSTFDLLNYLTIVRNLLVHQES
PPLVGRALWTLSIYSKSDLYNPQMLTEILDVTLCSLSPEKSHILRISAVRTLNGFLQANE
TIDGEKRTLLVSKLPGFLDGIMALVPGSKAAVLALLMEALTFMVKFDAEFAFASQAKITP
LAIAVFLKYTEDPYVLETVQDLIKALCQRKECLGPLQEKFIPTIVSILGLTGAASTEKQD
IALDVLNTIVRYTEPPLNNSLLETAFPAIINCVLHTDDHAVMVAGGECLRSFINVSPEQI
CSYKNGEGINCIMQVVATVLLNPMNSEMTAAGQIGRLVITIITKMGSMLGQNVDMLLKAV
ISKMQNLECLKVIMNLVLIFAHLFLTQMDAVLNFLSTVPGPNGEPAMQFVLTNWLSRQNS
FFGNYERKVTTMALCKLFEYGVATQDNRLTTITFKELVDDPTDTRRRTRSVAATTQKWVT
IPALVKIFKVLISEYQHFQEGKSDEPLTDSEEDGDDEDAPGNPDKPRYISDLFESDEDNA
EDEQLLQELLKETNYQGDIADNLQKFLTTFTQNEHFPTFYEHLTEGERLILLSKVQQK
Download sequence
Identical sequences Q9VGP4
FBpp0081862 7227.FBpp0081862 FBpp0081862 NP_001287284.1.81976 NP_650068.1.81976 FBpp0081862

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]