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Domain assignment for NP_001294717.1.50509 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001294717.1.50509
Domain Number 1 Region: 193-421
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 1.7e-40
Family Nuclear receptor ligand-binding domain 0.0062
Further Details:      
 
Domain Number 2 Region: 32-107
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 3.67e-20
Family Nuclear receptor 0.0011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) NP_001294717.1.50509
Sequence length 562
Comment Nuclear Hormone Receptor family [Caenorhabditis elegans]; AA=GCF_000002985.6; RF=reference genome; TAX=6239; STAX=6239; NAME=Caenorhabditis elegans; strain=Bristol N2; AL=Complete Genome; RT=Major
Sequence
MSLSEGEDDPCSSSSIYDMSLYGNFAEKSEMSNEMCRVCGKNSAGKHYSVPACHGCKSFF
RRAIIHKTAYPECKYDKMCFSKISRITRPRKCRYCRLQKCYEVGMVAIVAMHRKHDDSPL
RSSDSELPDLPLPSPIATRENYVSGIIDKLHSLDIQTDKFRKSAYNPLFIPNLEGILASP
GKLALADKYGAMPGWPLTQESFNEQQILMNQVNGDVLTDSSSSFVLPTADTPGINTKDWL
GFDMLTAIEYAKTFPFFQQLESNDKILLTKATTFMNLALTSNYSSFLSKMAVLQMPDGIC
ISGPVGQGEHEIRSFERRLSLRIMAPLIRNLFDRTEYVLLKAIILCNHAVTDLSCAAQNI
LTRERHNFTGALLLYCLSRHGSHAGPARYYSIINMIDVLEHYQRDFRDFMLLLDISLPTR
FAKHRKFLQREILNINVVCMVAISIILCPIFYLPMYGYQSNGLFRFVDWNLALPAIFTVY
CILGVVISVMDLFHYRLKAILTMNTKPRNLKIKRFVQQLIYLAYTVLVFTAVSYLGLLKI
QSSQDAIKPLVFEVSKLTAFWF
Download sequence
Identical sequences F07C3.10 NP_001294717.1.50509 F07C3.10 F07C3.10 6239.F07C3.10

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