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Domain assignment for NP_001306132.1.92730 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001306132.1.92730
Domain Number 1 Region: 504-561
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.97e-26
Family Classic zinc finger, C2H2 0.0067
Further Details:      
 
Domain Number 2 Region: 280-337
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.65e-24
Family Classic zinc finger, C2H2 0.006
Further Details:      
 
Domain Number 3 Region: 196-253
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.82e-23
Family Classic zinc finger, C2H2 0.0068
Further Details:      
 
Domain Number 4 Region: 448-505
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.06e-23
Family Classic zinc finger, C2H2 0.0081
Further Details:      
 
Domain Number 5 Region: 392-449
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.69e-23
Family Classic zinc finger, C2H2 0.006
Further Details:      
 
Domain Number 6 Region: 560-617
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.38e-21
Family Classic zinc finger, C2H2 0.0039
Further Details:      
 
Domain Number 7 Region: 336-393
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.26e-21
Family Classic zinc finger, C2H2 0.0088
Further Details:      
 
Domain Number 8 Region: 3-58
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 3.4e-20
Family KRAB domain (Kruppel-associated box) 0.00022
Further Details:      
 
Domain Number 9 Region: 602-654
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.33e-17
Family Classic zinc finger, C2H2 0.008
Further Details:      
 
Domain Number 10 Region: 154-206
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000000588
Family Classic zinc finger, C2H2 0.0098
Further Details:      
 
Domain Number 11 Region: 85-142
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000000109
Family Classic zinc finger, C2H2 0.016
Further Details:      
 
Domain Number 12 Region: 243-275
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000796
Family Classic zinc finger, C2H2 0.019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) NP_001306132.1.92730
Sequence length 667
Comment zinc finger protein 873 isoform 1 [Mus musculus]; AA=GCF_000001635.25; RF=reference genome; TAX=10090; STAX=10090; NAME=Mus musculus; AL=Chromosome; RT=Patch
Sequence
MAAVTYEDVHVNFTHEEWALLDSSQKSLYKDVMLETCRNLTAIGYRLEDHNIEEHCQSSR
RPGRYICNCGYKPCENEDHGKKQCSFACNSFLQMYERIYNEEKAYECNQYSKAFVNFHSL
PQHAKNHPREQPYECNHCGKAYVSPSSQIHKRSHVGEKPYECSKCGKAFENDNHLQNREK
HHTLEKLFECSQCGKAFASRSYLPIHRRIHTGEKPYECTQCGKAFTSRSYLKIHKSVHTG
EKPYECNQCSKAFANFYSLRQHEKYHTREKPYECSHCSKAFPSPSSLQVHERTHTGEKPY
DCTECGKAFISHSSLQIHKRVHTGEKPYECTLCGKAFVNRSYLEVHKRIHTGEKPYECSQ
CSKAFANFRSLRQHEKNHTREKPYECSQCSKAFVSPCHLQIHQRTHTGEKPYDCSDCGKA
FTRLSNLQVHKRTHTGQKPYCCSQCGKAFPCFSNLQIHERTHTGEKPYACNQCGKAFASR
ASLQYHEKHHTGEKPYGCNQCGKAFVSPSHLQIHQRTHTGEKPYECSQCGKAFARRSNLQ
IHERSHTGEKPYDCNQCGKAFASRASLQYHEKHHTGEKPYGCSQCGKGFALRSLLQVHER
THTGEKPHQCTQCGKAFVSRSYLQVHRRAHAGEKRYECIQCGKAFVYLTSLCSHRKFCAG
EKPCGSA
Download sequence
Identical sequences A0A1B0GT64
NP_001306132.1.92730

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