SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for NP_035265.1.92730 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  NP_035265.1.92730
Domain Number 1 Region: 12-262
Classification Level Classification E-value
Superfamily Ribonuclease H-like 2.66e-98
Family CAF1-like ribonuclease 0.000000000222
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) NP_035265.1.92730
Sequence length 285
Comment CCR4-NOT transcription complex subunit 7 isoform 1 [Mus musculus]; AA=GCF_000001635.25; RF=reference genome; TAX=10090; STAX=10090; NAME=Mus musculus; AL=Chromosome; RT=Patch
Sequence
MPAATVDHSQRICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADY
QYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSG
IQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELD
FFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFK
MREMFFEDHIDDAKYCGHLYGLGSGSSYVQNGTGNAYEEEASKQS
Download sequence
Identical sequences B3DMA5 L8J4C7 Q3ZC01 Q543X5 Q60809 W5PI55
10090.ENSMUSP00000117304 10116.ENSRNOP00000016882 9913.ENSBTAP00000024009 ENSMUSP00000034012 ENSOARP00000010123 ENSRNOP00000016882 ENSMUSP00000034012 354698 GO.47604 ENSBTAP00000024009 ENSMUSP00000034012 ENSMUSP00000117304 ENSMUSP00000122933 NP_001029484.1.59421 NP_001029484.1.76553 NP_001100783.1.100692 NP_001100783.1.4139 NP_001258471.1.92730 NP_035265.1.92730 XP_004021782.1.66739 XP_004672650.1.11716 XP_005887455.1.15283 XP_005969114.1.78601 XP_006080217.1.26621 XP_010818548.1.76553 XP_010856676.1.44457 XP_011240485.1.92730 XP_012014570.1.54773 XP_017897409.1.57651 XP_019808973.1.53367 XP_020739027.1.74333 XP_020739035.1.74333 XP_020739043.1.74333 XP_021074272.1.100879 XP_021074273.1.100879 XP_021482848.1.76796 XP_021482849.1.76796 ENSBTAP00000024009 ENSRNOP00000016882

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]