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Domain assignment for NP_057227.2.87134 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_057227.2.87134
Domain Number 1 Region: 253-368
Classification Level Classification E-value
Superfamily Ubiquitin-like 9.3e-34
Family UBX domain 0.00000171
Further Details:      
 
Domain Number 2 Region: 174-269
Classification Level Classification E-value
Superfamily NSFL1 (p97 ATPase) cofactor p47, SEP domain 1.24e-33
Family NSFL1 (p97 ATPase) cofactor p47, SEP domain 0.00000163
Further Details:      
 
Domain Number 3 Region: 1-46
Classification Level Classification E-value
Superfamily UBA-like 0.00000000000306
Family TAP-C domain-like 0.00038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) NP_057227.2.87134
Sequence length 370
Comment NSFL1 cofactor p47 isoform a [Homo sapiens]; AA=GCF_000306695.2; RF=na; TAX=9606; STAX=9606; NAME=Homo sapiens; AL=Chromosome; RT=Major
Sequence
MAAERQEALREFVAVTGAEEDRARFFLESAGWDLQIALASFYEDGGDEDIVTISQATPSS
VSRGTAPSDNRVTSFRDLIHDQDEDEEEEEGQRFYAGGSERSGQQIVGPPRKKSPNELVD
DLFKGAKEHGAVAVERVTKSPGETSKPRPFAGGGYRLGAAPEEESAYVAGEKRQHSSQDV
HVVLKLWKSGFSLDNGELRSYQDPSNAQFLESIRRGEVPAELRRLAHGGQVNLDMEDHRD
EDFVKPKGAFKAFTGEGQKLGSTAPQVLSTSSPAQQAENEAKASSSILIDESEPTTNIQI
RLADGGRLVQKFNHSHRISDIRLFIVDARPAMAATSFILMTTFPNKELADESQTLKEANL
LNAVIVQRLT
Download sequence
Identical sequences A0A2J8VI81 A0A2K5QJL6 G3SJI5 H2R963 Q5RBG3 Q9UNZ2
ENSP00000216879 ENSPTRP00000052472 gi|20149635|ref|NP_057227.2| ENSP00000216879 ENSPTRP00000052472 NP_001125510.1.23681 NP_057227.2.87134 NP_057227.2.92137 XP_001154255.1.37143 XP_004061716.1.27298 XP_017371066.1.71028 ENSPPYP00000012121 9600.ENSPPYP00000012121 9606.ENSP00000216879 ENSPPYP00000012121

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