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Domain assignment for NP_060014.2.87134 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_060014.2.87134
Domain Number 1 Region: 604-663
Classification Level Classification E-value
Superfamily R3H domain 0.0000000000019
Family R3H domain 0.0028
Further Details:      
 
Domain Number 2 Region: 337-416
Classification Level Classification E-value
Superfamily dsRNA-binding domain-like 0.000000000314
Family Double-stranded RNA-binding domain (dsRBD) 0.0079
Further Details:      
 
Domain Number 3 Region: 440-517
Classification Level Classification E-value
Superfamily dsRNA-binding domain-like 0.0000000038
Family Double-stranded RNA-binding domain (dsRBD) 0.01
Further Details:      
 
Weak hits

Sequence:  NP_060014.2.87134
Domain Number - Region: 191-276
Classification Level Classification E-value
Superfamily dsRNA-binding domain-like 0.00562
Family Double-stranded RNA-binding domain (dsRBD) 0.021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) NP_060014.2.87134
Sequence length 690
Comment NF-kappa-B-repressing factor isoform 2 [Homo sapiens]; AA=GCF_000306695.2; RF=na; TAX=9606; STAX=9606; NAME=Homo sapiens; AL=Chromosome; RT=Major
Sequence
MEKILQMAEGIDIGEMPSYDLVLSKPSKGQKRHLSTCDGQNPPKKQAGSKFHARPRFEPV
HFVASSSKDERQEDPYGPQTKEVNEQTHFASMPRDIYQDYTQDSFSIQDGNSQYCDSSGF
ILTKDQPVTANMYFDSGNPAPSTTSQQANSQSTPEPSPSQTFPESVVAEKQYFIEKLTAT
IWKNLSNPEMTSGSDKINYTYMLTRCIQACKTNPEYIYAPLKEIPPADIPKNKKLLTDGY
ACEVRCQNIYLTTGYAGSKNGSRDRATELAVKLLQKRIEVRVVRRKFKHTFGEDLVVCQI
GMSSYEFPPALKPPEDLVVLGKDASGQPIFNASAKHWTNFVITENANDAIGILNNSASFN
KMSIEYKYEMMPNRTWRCRVFLQDHCLAEGYGTKKTSKHAAADEALKILQKTQPTYPSVK
SSQCHTGSSPRGSGKKKDIKDLVVYENSSNPVCTLNDTAQFNRMTVEYVYERMTGLRWKC
KVILESEVIAEAVGVKKTVKYEAAGEAVKTLKKTQPTVINNLKKGAVEDVISRNEIQGRS
AEEAYKQQIKEDNIGNQLLRKMGWTGGGLGKSGEGIREPISVKEQHKREGLGLDVERVNK
IAKRDIEQIIRNYARSESHTDLTFSRELTNDERKQIHQIAQKYGLKSKSHGVGHDRYLVV
GRKRRKEDLLDQLKQEGQVGHYELVMPQAN
Download sequence
Identical sequences A3F769 H2QZ19 O15226
ENSP00000304803 ENSP00000360582 9598.ENSPTRP00000038260 9606.ENSP00000304803 gi|291084508|ref|NP_001166959.1| gi|63003897|ref|NP_060014.2| NP_001166959.1.87134 NP_001166959.1.92137 NP_060014.2.87134 NP_060014.2.92137 XP_003812668.1.60992 XP_009437843.1.37143 XP_011529667.1.92137 HR3512 ENSP00000304803 ENSP00000360582

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