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Domain assignment for NP_080526.2.92730 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_080526.2.92730
Domain Number 1 Region: 134-286
Classification Level Classification E-value
Superfamily Ribonuclease H-like 6.07e-20
Family Retroviral integrase, catalytic domain 0.068
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) NP_080526.2.92730
Sequence length 518
Comment gypsy retrotransposon integrase-like protein 1 isoform 1 [Mus musculus]; AA=GCF_000001635.25; RF=reference genome; TAX=10090; STAX=10090; NAME=Mus musculus; AL=Chromosome; RT=Patch
Sequence
MVRSGKNGDLHLKQIAYYKRTGEYHPTTLPSERSGIRRAAKKFVFKEKKLFYVGKDRKQN
RLVVVSEEEKKKVLRECHENGPGVHHGISRTLTLVESGYYWTSVTNDVKQWVYACQHCQV
AKNTVIVAPQQHLPMVGNPWSVVTVDLMGPFHTSNRSHVYAIIMTDLFTKWVMILPLCDV
SASEISKAIINIFFLYGPPQKIIMDQRDEFIEQINVELYRLFGAKEIVISRASGSVNPAE
NTPSTIKTFLSKHCADHPNSWDEHLPALSFAFNVTHLEPNKNTPYFQMFNRNPCVLECPP
EEGSEGTSVFARIVAAIREADGVVENKTPASSQMENNNSDELSKSKVVKKKAKQLNPFHL
KVGHEVLRQRKNWWKDGRFQSEWVGPCVIDYITESGCAVLRDNTGTRLKRPIKMSHLRPY
VRESSEQDSLYLLQGSIVADHDYIGLPEIPVGTYQANILVEDATIGIADNELLISSKDHE
LLEYRNSKISALVEDHSSLEKQTFSLLDSSNQVLEYLS
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Identical sequences Q8K259
NP_080526.2.92730 10090.ENSMUSP00000108464 ENSMUSP00000108464 ENSMUSP00000027571 ENSMUSP00000108464

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