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Domain assignment for NP_506905.1.50509 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_506905.1.50509
Domain Number 1 Region: 129-355
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 4.13e-24
Family Nuclear receptor ligand-binding domain 0.0073
Further Details:      
 
Domain Number 2 Region: 21-120
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 1.12e-19
Family Nuclear receptor 0.001
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) NP_506905.1.50509
Sequence length 405
Comment Nuclear hormone receptor family member nhr-199 [Caenorhabditis elegans]; AA=GCF_000002985.6; RF=reference genome; TAX=6239; STAX=6239; NAME=Caenorhabditis elegans; strain=Bristol N2; AL=Complete Genome; RT=Major
Sequence
MFTLARVLNNIGSASSNEPIPYCLICSEVADGNHFGVAAACRACAAFFRRTVQHNKIHEC
GRNGQCFFLSCKFLLVGFQISPLSSDARSMCKACRYGKCLEMGMQRSSVQQRREQLGKRL
NISDDRGKPVLNKLRRAYEMLILNRKHVHNRRENQAPRAIGFNELPIVFQNESTSIYQFL
WEAFPEYSMLLPDTKLAFFKNFFLSFCLFESSFNGCSAKQKNVMLIPSGDYIDLAHSESF
FTNDHQTFTERDNIEILAQRLKLIQSSITVPLSAENVDIYEFLALAGIILLESDSESEAD
FQEEAVKIKSNIIKDLLFHYQCINIYDDAAMRLGAVLSILPSIQVCCSRSNNFLIINSKD
VSESQSPFSRIHGNQKYAQFVRSSQESLRHVLANFIKFICKFVSI
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Identical sequences O17934
6239.K06B4.10 K06B4.10 K06B4.10 NP_506905.1.50509 K06B4.10

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