SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for NP_595867.1.19918 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  NP_595867.1.19918
Domain Number 1 Region: 91-175
Classification Level Classification E-value
Superfamily HMG-box 3.01e-23
Family HMG-box 0.00056
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) NP_595867.1.19918
Sequence length 181
Comment mating-type m-specific polypeptide mc 2 [Schizosaccharomyces pombe 972h-]; AA=GCF_000002945.1; RF=representative genome; TAX=4896; STAX=4896; NAME=Schizosaccharomyces pombe; strain=972h-; AL=Chromosome; RT=Major
Sequence
MDSHQELSAGSPISYDFLDPDWCFKRYLTKDALHSIETGKGAAYFVPDGFTPILIPNSQS
YLLDGNSAQLPRPQPISFTLDQCKVPGYILKSLRKDTTSTERTPRPPNAFILYRKEKHAT
LLKSNPSINNSQVSKLVGEMWRNESKEVRMRYFKMSEFYKAQHQKMYPGYKYQPRKNKVK
R
Download sequence
Identical sequences C7U331 P0CY16 P0CY17
NP_595867.1.19918 NP_595875.1.19918 4896.SPBC1711.02-1 4896.SPBC23G7.09-1 SPBC1711_02.1 SPBC23G7_09.1 SPBC1711.02 SPBC23G7.09 SPMTR.04

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]