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  Home > Genomes > NCBI 2017_08 genome > NP_741632.2.50509

Domain assignment for NP_741632.2.50509 from NCBI 2017_08 genome

Domain architecture

Domain assignment details

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Strong hits

Sequence:  NP_741632.2.50509
Domain Number 1 Region: 136-376
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 8.35e-85
Family Calponin-homology domain, CH-domain 0.0000113
Further Details:      
 
Domain Number 2 Region: 3762-3890
Classification Level Classification E-value
Superfamily PH domain-like 1.71e-32
Family Pleckstrin-homology domain (PH domain) 0.00089
Further Details:      
 
Domain Number 3 Region: 401-517
Classification Level Classification E-value
Superfamily Spectrin repeat 4.32e-29
Family Spectrin repeat 0.00014
Further Details:      
 
Domain Number 4 Region: 1612-1763
Classification Level Classification E-value
Superfamily Spectrin repeat 1.1e-27
Family Spectrin repeat 0.00067
Further Details:      
 
Domain Number 5 Region: 1405-1553
Classification Level Classification E-value
Superfamily Spectrin repeat 3.91e-27
Family Spectrin repeat 0.00097
Further Details:      
 
Domain Number 6 Region: 3419-3573
Classification Level Classification E-value
Superfamily Spectrin repeat 9.17e-24
Family Spectrin repeat 0.0019
Further Details:      
 
Domain Number 7 Region: 1978-2092
Classification Level Classification E-value
Superfamily Spectrin repeat 6.24e-23
Family Spectrin repeat 0.001
Further Details:      
 
Domain Number 8 Region: 3099-3250
Classification Level Classification E-value
Superfamily Spectrin repeat 9.29e-23
Family Spectrin repeat 0.0016
Further Details:      
 
Domain Number 9 Region: 3252-3365
Classification Level Classification E-value
Superfamily Spectrin repeat 1.32e-22
Family Spectrin repeat 0.0016
Further Details:      
 
Domain Number 10 Region: 1834-1977
Classification Level Classification E-value
Superfamily Spectrin repeat 1.51e-22
Family Spectrin repeat 0.0023
Further Details:      
 
Domain Number 11 Region: 804-912
Classification Level Classification E-value
Superfamily Spectrin repeat 4.08e-22
Family Spectrin repeat 0.0011
Further Details:      
 
Domain Number 12 Region: 2799-2932
Classification Level Classification E-value
Superfamily Spectrin repeat 1.44e-21
Family Spectrin repeat 0.00029
Further Details:      
 
Domain Number 13 Region: 2142-2295
Classification Level Classification E-value
Superfamily Spectrin repeat 2.62e-20
Family Spectrin repeat 0.0048
Further Details:      
 
Domain Number 14 Region: 2674-2829
Classification Level Classification E-value
Superfamily Spectrin repeat 3.67e-20
Family Spectrin repeat 0.0016
Further Details:      
 
Domain Number 15 Region: 2996-3146
Classification Level Classification E-value
Superfamily Spectrin repeat 1.1e-19
Family Spectrin repeat 0.0013
Further Details:      
 
Domain Number 16 Region: 2514-2617
Classification Level Classification E-value
Superfamily Spectrin repeat 3.36e-19
Family Spectrin repeat 0.001
Further Details:      
 
Domain Number 17 Region: 597-731
Classification Level Classification E-value
Superfamily Spectrin repeat 9.81e-19
Family Spectrin repeat 0.0022
Further Details:      
 
Domain Number 18 Region: 519-630
Classification Level Classification E-value
Superfamily Spectrin repeat 6.28e-18
Family Spectrin repeat 0.00037
Further Details:      
 
Domain Number 19 Region: 2403-2518
Classification Level Classification E-value
Superfamily Spectrin repeat 8.77e-17
Family Spectrin repeat 0.0023
Further Details:      
 
Domain Number 20 Region: 1310-1434
Classification Level Classification E-value
Superfamily Spectrin repeat 9.89e-17
Family Spectrin repeat 0.00075
Further Details:      
 
Domain Number 21 Region: 1187-1312
Classification Level Classification E-value
Superfamily Spectrin repeat 4.75e-16
Family Spectrin repeat 0.0035
Further Details:      
 
Domain Number 22 Region: 2295-2412
Classification Level Classification E-value
Superfamily Spectrin repeat 6.33e-16
Family Spectrin repeat 0.0014
Further Details:      
 
Domain Number 23 Region: 1040-1139
Classification Level Classification E-value
Superfamily Spectrin repeat 9.36e-16
Family Spectrin repeat 0.002
Further Details:      
 
Domain Number 24 Region: 2913-3003
Classification Level Classification E-value
Superfamily Spectrin repeat 0.0000000000000432
Family Spectrin repeat 0.0019
Further Details:      
 
Domain Number 25 Region: 737-839
Classification Level Classification E-value
Superfamily Spectrin repeat 0.000000000000302
Family Spectrin repeat 0.00097
Further Details:      
 
Domain Number 26 Region: 927-991
Classification Level Classification E-value
Superfamily SH3-domain 0.0000000000144
Family SH3-domain 0.0015
Further Details:      
 
Weak hits

Sequence:  NP_741632.2.50509
Domain Number - Region: 3571-3638
Classification Level Classification E-value
Superfamily Spectrin repeat 0.000417
Family Spectrin repeat 0.0048
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) NP_741632.2.50509
Sequence length 4166
Comment SMAll [Caenorhabditis elegans]; AA=GCF_000002985.6; RF=reference genome; TAX=6239; STAX=6239; NAME=Caenorhabditis elegans; strain=Bristol N2; AL=Complete Genome; RT=Major
Sequence 
MSYVSFAASYSPGEGKTVRNLNDKVEGYRKEIAPSRENVDFDHLRRTPRDPLPENDYQAT
SSTGLSSGEVKPYQYRDYHQHQKHEYYGEGVNDGVSEDNVEDKMRKYEMQVRVPTSGAPP
VRADANGTDQDEFNNETLYFERSRIRTLQDERVHIQKKTFTKWCNSFLNRASLEIVDLFE
DVGDGIMLMKLLEIISGDKLGKPNRGRMRVQKVENLNKVLDFLKKKKIQLENIGAEDILD
RNERLILGLIWTIILRFQIDTIVIEDEEERGERKHAKDALLLWCQRKTAGYPNVRIENFT
TSWRNGLAFNALIHSHRPDLVDFNRLNPNEHVDNLNHAFDVAEKKLEIARLLDAEDVDVT
RPDEKSIITYVSLYYHHFAKQKTEMTGARRIANIVGKLMVSETMEDDYEHIASELLNWIR
VTIKTLESRRFPNSLNGMREEHAKFNQFRTSEKPPKYKEKGELEALFFTIQTKRKAMSRK
QYQPPQGLFMHDIESAWAQLDYAENERQVAIIAELQRQEKLEQLAQRFHKKAKLRDSWLR
SVQVVLEEMEHGRSASQVEKTLKKQQAISTDILAREDRFKMLTAMCNELCTEKYHESDKV
RGMEREIIDRWTQLLTLLEQRKRALMSLNDLMSLLRDIDTLSNELYSLEPAVRNRDVGKH
LIGVEDLLGKHDLLDAQINAHGSLLSKLSQSANNYIRHKEEQFDVLQRKLDEVTAQYNTL
VELCRSRRLGLERARSLFQFVQDHEEEMAWLAEKEKLCTTALNSGDISAVPQTTLLYKNV
EMEMQTHWARSKGMIAGGERLVQNGQSKEDIQRRLTQMNHRWERLRVAVDALGNWLSEAR
HAQQYFQDANEAESWIREKMPLVKSDDLGRDEGAAESLLQRHARLEEEIRAYKSDISRLE
EMQSQLANSAFHTATTSQSVQETEEVNVPQVEMSYNYEGNGMRVSKGEVLALLEKSTPEW
WRALKRDGTEGYVPANYCKIVPGETVTVTQTTQKTTTTLEGNETKSSVVADRQHKISNDY
RELKRLADVRRRLLSDNIKLLRFYRECDEFERWAKEIEVSLADEPSPEHVAAFRRKFDKL
EADMKTNGGTQLKHINDIANDLISEGHGQSRKIEVRQHKINAMWDNLERLRKQRGVRLEA
TERVADFDTTCESAREWMLSKFEQLDRNPNDVKSLQNLERDLKPLEDKIAALEKLAAAVK
KDHPEEAAAIERKIAELRALHADLLRRAQEKMLLAEQTQGKEMFESALRDMIGWIEKTRK
VMMEDVHPVDVAEAEELLKKHYELGEQIKDKKYEVEYCQELGRRLLERNPRMSKVEEQLQ
NLVSEMASLRDLYRRRDTILKQQLDLQLFNRESERIDAATKGHEAFLEFDNLGDSVESVE
NLLKRHRDLEAKLDAQEARLEAFSRTADDMIKAQHADSAYIEQRRRDVLARREAVRRAAA
QRKKQLEASLEYQEMRREADEVVGWMYEKAKLVMSGDDSALAPSAIPHRLLKHEAFEAEI
IANEPRIQQINSEGDGLVSKKHYESPNVEKIVRQVNAQWGDLKKQVWNKGLRLRQAADQK
GLDRILEDAHAKLDEMQTALNSKDQGLDLRSVKDLLQKHAVLEQEMGLYGNKLSDIENRG
KKMAVDGHYDADRIHSTVGQLLQRYAAMKGPAQRRKGDLDESRLWHQLVFDVDCELQWIA
EKKPIASSQDCGRTLTEALNMVKKQEQLEAEVNQHGGQIDKVLLQAGELIKRHHSASSQI
KAKSSELETAWSELKKLLRLRRAVVDWGVKEQQYLFDAAEVESWMNEKRNALASEDYGND
EDAARKLLSKHRALCEDMTTYRQWLEKLEVKCVELVESNRPHVERFQKRQDELVREFDAL
SKLAEDRRNALEDAVCLYEYMRESADLGQSIEENLRVAMSEEFAEDYEHLKELQSKFDEF
KQKVKNGSERFTSCETAANAILRRNPPFARDVVKKQEALRTAWNTLCEYIEARDSKLAVA
EELHRFHRDVDEFEQWMADKMANMPRDLGRDVKHVHSLWQHHEALDKEIHNSQPRLAKLV
EEAERLKKTYPGGNAEQIGGRQQTLEQEWEELKNATDDRKDMLRAAFDLHTFNGKVRDLL
AWTDLTISDIQSDLHINDLQQAEWLQTEHSRLSHEMDAREPEFARLVNDGEKMITAQHYA
SEEIKNKTHLLKSALERLRSEWALRNGFLSQAVQWHAFQREAKQIIASIGSKRTTLRSLA
VGGSVADVESQTKRLDTFEKALSTLDERTATLDHTANELMKARHMESKNISMWQSNVHEE
LKLLRQDIEARHAMLKDAFALASFDSDVAQIEAWIDEKTNGVRKAQDLSSESISIDEKMK
RLQTHQALEAEVTANKPVVDQILQRGNQLKNLHRNPKIANRCDELSYKWNQLSGACADQS
LALEEARDLLRFKQLVENVLAWINEKEVLVSTADMGKDMEHCRLLLERLDGTRSDSIVDE
QTLDEINRLGEKLVKQGRSSRDQVQKEQQHLNEKWRLLLGQLAHYRTELLAAMEVHTFNR
DVEDTDERIHEKVAAMKSDDYGKDFASVELLVRKQSALERDMSAIHQKLIAHDKDAQKIL
EKRPPLRETVLDSLKKLEESWEQLSKAAELRNEKLNRSFKLYKYLDDVKKVEQWANQVRN
KMTSHQTPKDSNGARKILEQHHERKAEIDGRSEELRLLHEEGQALNQEQPEHKAEVQRAH
KRVQNSEHQLRQTWESEKGTLQKLLEWMLWCDEAVQCEQWLSDKETQVARGELGDTTDAV
EMLIKGHSAFEETVRKQSEKIDALTKNADALVSGGNNYRADIVTRSEEVTARHALLLKSM
EKRGHMLEDSKKYHEFIRQCGELIIWITAKLQLAYDESFLDHTNLRSKLQKHMAFDSELV
ENEKRLSTVERQGEQLVTDNHFMSEQVKAQLVELRSGWDELRTKSALKTQRLREAFELHS
LQRKVEDIEKWLDKVEGELSSDDHGRDILSTELLIKKLDTLQTEIAGRSDAVVEMMKKAR
ELRVQGSAAADDCLKQAEQVEARYSGLDEPVQIRRENLVDAQAFFQWVKAAEEDLEWLSD
RMMLASSGESGDSLQSALSLQKKHATLEKELDTRQSAMNDTEQRGKDMIRQRHFASTHIQ
KILDRLSSAMLTLKESCGLRRDLLQEAIDAHEYYTEETEAEQWLREQMPLAMSQEMGRDQ
AGAESHLRRLTVLDKEVELFKNEIDRLKKRADGLLAREHHDAMSIAAKQRKLEALFGDLC
RECARRRTQIVDASKYHKFVRQADDLSDWLREKERSASAEDYGQDLEDCQQIIEQFESTV
RELAAAGERVAAVQRAQEDLLRSGHPYGASITAKGADVQRLWTHVNEVANERKQALNGAR
QVHRFDQEADQILNWLQDKEATGVAMEQEDLSRADLASVKAQLQRHDEFMHGMKAVEKQV
AELCHEAERLWNSFPDTRHHLEVRRLDMEEQLKDILEAAKKHLEKLRHMQSLQSYFQEYR
EMMQWMKNMQSTMTSEQLPRDVASCESLVRRHDEYNLEMQGRKPFVDDFARQGRRMIQSS
HVLSQEIQEKVDILEKSWAMLCEIWKDRAELYEENMDVQKWKQNAEQLDSWLEERAGLLG
DDWRMVDSVEMAETHLRDFDDFLVTLEAQSEKCDMVKRLTLVEQNFSRLRSKEIDRARIA
EDDQKRRDTIKIVEKGNILANRRQERERRKTQEISLLRPSPSGEEFSTHTMPRKERKDRA
KTTADLAPGAIQIGDILASSSTVAPLQSGVEMTKTPSFNTRRTQSIRKGSRWEDMGAIDM
KGFFDRKQCQQSGGKRATIRSWKNYYGILCGQLLCFFKDEQQFLENVAAAPPVYIYGAQC
EQYPEYAKRKNSFRLLLQDGSEFIFSCPDERQMLEWVAKIKFHAHLTPSNQLKSYAYNDD
LFQSPDQPPMVAPRRNIGGHDVANRMSHASSVFTTSDDLEQHELDYSRRCSSLPRGKHSG
QITMRDCATLPRGFGSDVMEQQPTAFFPPSGPLLATPSVLTMSSSSMTANVMPTVVTRKI
GVVRRASRRQSVYAESIYGEVEQAIAEANRVSTSRPNGDHAELRHTIQVHPGSSGYTETL
MYKEHTSSNYQPMERSVSPRNQQNGEFITWVESNQQNQPMNTPDGRSTSASVVSTPSNYD
DSDSIKSSSKRKGFGSLFKRGSKHSK
Download sequence
Identical sequences G5EFW3
R31.1a NP_741632.2.50509 R31.1a 6239.R31.1a R31.1a

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.