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Domain assignment for NP_989115.1.99540 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_989115.1.99540
Domain Number 1 Region: 1-130
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 1.83e-50
Family Calponin-homology domain, CH-domain 0.000000185
Further Details:      
 
Domain Number 2 Region: 195-255
Classification Level Classification E-value
Superfamily EB1 dimerisation domain-like 7.19e-21
Family EB1 dimerisation domain-like 0.0000363
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) NP_989115.1.99540
Sequence length 269
Comment microtubule-associated protein RP/EB family member 1 [Xenopus tropicalis]; AA=GCF_000004195.3; RF=representative genome; TAX=8364; STAX=8364; NAME=Xenopus tropicalis; strain=Nigerian; AL=Chromosome; RT=Major
Sequence
MAVNVYSTSVTSDNLSRHDMLAWINESLQLNLTKIEQLCSGSVYCQFMDMLFPGSVVLKK
VKFQAKLEHEYIQNFKVLQAGFKKMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDANYD
GKDYDPVAARQGQESAPVPVLAAPVLNKPKKPLGSGNTAPQRTVPVQRTAVSNKPPAQGI
SKKPATVGNGDDESAELIQQINVLKITVEDLEKERDFYFGKLRNIELICQENEGESDPVL
QRIIEILYATDEGFVIPDEGAPPEDQEEY
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Identical sequences Q6P848
NP_989115.1.99540 XP_012827058.1.99540 XP_017945588.1.99540 ENSXETP00000055099 gi|38512258|gb|AAH61382| gi|45360879|ref|NP_989115| gi|60390185|sp|Q6P848| ENSXETP00000055099

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