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Domain assignment for WP_000517842.1.71300 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_000517842.1.71300
Domain Number 1 Region: 2362-2605
Classification Level Classification E-value
Superfamily PMT central region-like 3.14e-51
Family PMT central region-like 0.0063
Further Details:      
 
Domain Number 2 Region: 2907-3026
Classification Level Classification E-value
Superfamily PMT central region-like 2.35e-28
Family PMT central region-like 0.0018
Further Details:      
 
Domain Number 3 Region: 3085-3232
Classification Level Classification E-value
Superfamily ADP-ribosylation 6.4e-19
Family ADP-ribosylating toxins 0.013
Further Details:      
 
Domain Number 4 Region: 4130-4340
Classification Level Classification E-value
Superfamily beta-Roll 0.000000000000051
Family Serralysin-like metalloprotease, C-terminal domain 0.003
Further Details:      
 
Domain Number 5 Region: 3974-4002,4048-4140
Classification Level Classification E-value
Superfamily beta-Roll 0.000000458
Family Serralysin-like metalloprotease, C-terminal domain 0.003
Further Details:      
 
Weak hits

Sequence:  WP_000517842.1.71300
Domain Number - Region: 1461-1598
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 0.000164
Family beta-mannanase CBM 0.087
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_000517842.1.71300
Sequence length 4411
Comment peptidase C80 [Vibrio cholerae]; AA=GCF_000303085.1; RF=na; TAX=991999; STAX=666; NAME=Vibrio cholerae HE-16; strain=HE-16; AL=Scaffold; RT=Major
Sequence
MGKPFWRSVEYFFTGNYSADDGNNNIVAIGFWGQIHAYGGDDHVTVGSIGATVYTGSGND
TVVGGSAYLKVNDTTGHLTVKGAAGYADIHKNGNGNVSFAGAAGGVSIDHLGNHGDVSYG
GAAAYNGISRKGGSGNVTFKGAGGYNSLWHETNQGNLSFIGAGAGNKLDRTAFNRYQGSR
GDVTFDGAGAANSISSRVETGNITFRGAGADNHLVRKGKVGDITLQGAGASNRIERTYQA
GDVYTQTRGNIRFEGVGGYNSLYSDVAHGDIHFSGGGAYNTIIRKGSGSDFDAQGMEYAK
ADEIVLTTAQMHGFSIANGNKLHTVSAIKSQREPNTYLFAIADDTYTKINKIRLYNDAKT
GKLNYYSEAWFKSGNHLENLANADVSSSGGFEPNPLKGGYTLSNIGIEHQQSVTVHAVEK
SLTEYEWVTYANGAVIDAKDVSLSDAKMGGHAIYADGTKVDVKAVKSNRQPNTYIYAKVL
GPYTKIVVVELANDPKTGALKYQARSWYKEGDHSANIANQDISSATGYNPMGKGGYSLSD
LHYSVNAVRSTSETVADIEEYTDQTLFKPANDSGESSGDVRFNGAGGGNVIKSNVTRGNV
HFNGGGIANVILHSSQFGNTEFNGGGAANVIVKSGEEGDLTFRGAGLANVLVHQSQQGKM
DVYAGGAVNVLVRVGNGDYLAHLLAYGNISVQKGEGNSRVTLLGGYNTHTQIGSGDALWL
AAGGFNVMTQVGQGDVASVLAGGANVLTKMGEGELTSGMLGGANVITHISNDDQLSNTTA
VALGGANILTKKGKGNTLAVMGGGANVLTHVGDGTTTGVMVGGANILTKVGNGDTTGIML
GVGNVLTHVGDGQTLGVMGAAGNIFTKVGDGTSIAVMIGAGNIFTHVGEGNAWALMGGLG
NVFTKVGNGDALALMVAEANVFTHIGDGMSVALMLAKGNVATKVGNGTTLAAMVGNANIF
THIGHGSTFAAMIGQANIMTKVGNDLTAALMVGKANIMTHVGDGTSLGLFAGEVNVMTKV
GNGTTLAAMFGKANIMTHVGDGLTGVLALGEANIVTKVGDDFMGVVAAAKANVVTHVGDA
TTAAVLAGKGNILTKVGEGTTVGLLISDVGNVMTHVGDGTTIGIAKGKANLITKVGDGLG
VNVAWGQANVFTQVGDGDRYNFAKGEANLITKVGDGQEVSVVQGQANIITHVGNGDDYTG
GWGKANVITKVGNGRNVVLAKGEENIVTQVGDGDSFNALWSKGNIVTKVGDGMQVTAAKG
QANITTTVGNGLSVTAAYGDANINTKVGDGASVNVAWGKYNLNTQVGDGLNVAVMKGKAN
ANIHVGDGLNINASYAQNNVAIKVGNGDFYSLAVASSNTSSNKLSALFDNIKQTVLGVGG
SQAINYLVQGDEASSSGTHKGRGAIATPEITKLDGFHMDAIKEVGSDLGDSLTGSVTKVD
TPDLNKMQHALNVDDSSVQAPNLIVNGDFEQGEHGWQSTHGVEASYAGSVYGVEGEGHGA
RVTELDTYTNTSLYQDLANLAQGEVIAVSFDFAKRAGLSNNEGIEVLWNGVVVFSSSGDE
SAWQQKTLKLTAQAGSNRIEFKGTGHNDGLGYILDNVVATSESSQQANAIRDHASQPQAA
QNALSDKERAEADRQRLEQEKQKQLDAVAGSQNQLESTDQQALENNGQAQRDAVQEESEV
VTAELTKLAQGLDVLDGQTSHSGHSGEQWRNEFASGLLAGVQTQLDDAKQLANDKIAEAK
QTHADNQNKVKDAVAKSEAGVAKGEQNRAGAEQDIADAQADAEKRKADALAKGNEAKQAE
FDAHNAVNNAQSRGDRDVQMAENKANQAQADAQDAKQNEGDRPDRQGVTGSGLSGNAHSV
EGAGETDSHVNTDSQTNADGRFSEGLTEQEQEALEGATNAVNRLQINAGIRGKNSVSTIT
SMFTEANTDSIVVPTTTSQDVVRKEIRISGVNLEGLGEASHDSAASLVAVRAEKVANLYR
WLDSDHPRATEQYIPVPGFERVDVNVSDETKQRLTQFVSGYIEHTDNQVPKDQAQALATL
FVEATLNYDWDKRVEFLTKLESYGYSFEAPHGENSLVSFWSGRNFKEYRNVLDNAQPDGK
KVVYDIDVQGNAFALKLNKQLMRWGDMFLDLDNAAQNHLQSSIEAAAYSNTGFWSSVYAT
GAKDDVYVIAEGGMRLGNYFWNVELPLLRQLQREGLAGEIRLLDKPVSEYKDVPVNEIGH
KLTDAGVGVKVRFDALSAEQQAELLAINPKGYKADSLVELDVKLSAIDSMLRDALPFYSL
RTERNLLVQEGDEGFKVRAWPGNDDKSKTIVLDNPEDATQQKTIERFILANFQNFEQMPD
ELFLVDNKVISHDKGITHVLAQKVDGAWLYNAKVDLMSVTELLDAANVTGKIRGESYQQV
IDALADYHASITEHADYAPESVEKLLNLRKNIEGYVLGHPDSGRIAAMKSLLNQVNTRLE
EVSVLAVSEPNIKAQDSFSRLYDQLETANLKGTKHLYLDQNGEFVTKGKGHLVNIDLLGN
SEAVIEKVKLAVSNEYGQTIADTIFAGLTAHDLAKDGKGIDITGLKKVHLAIEQHLSPVS
ATLFLWKPSDHSALGHAALQIGQGRNQINTDQALAYNQSNYVSWWPMGSKSSSLNHLFDV
SSEAMPDLKLRWKDFSQPAAQGESLAFDMQSEENDDFGLKSAEDKLKDFIKQVASASGVD
EKFKDISEAFTMMALMNPDILESANIPEHISKPFVDQWNDTSYDMQDVAQRFAKELQEQA
KVAVNSEQMEQQISEVVRRFAKDELDKIQTFKEMQADQGRVFRINLEGLDVAAMQAEWHR
LSNDSDARYQLLNKNCSSIVAKVLKAGGADKLIGHTWRPKFGVWTPTELFNFAQDLQEAQ
LVSHTKKEHIDTDSLQSTDRVLESLGESKQTTLDLSSVLTKDELKNEAKVFAKPIGESYQ
KILDQLDLLHATQGDKQLEAGLRLNNLVDDYVSNHEKSGRNTALLSLKNRVTESLYSNVA
QESRVEIAKLSADRIDLAVDLLHRLRSSTNEVSSVVDIKSLADGTKYNSQESLAVLSKQE
VPFNKDLQDQQLVQGRVTGEAVLNKVQLSDDEIKGIKWYTSEGFQYVNEALRKEEKLAYF
VKDNAVNAVKGLSKLETFEGTVYRAFIPGVSLNDLASHVTPGQLFSDQGFTSTSTSTELA
KSFRGGKGTVILTILDAKGTNVAGLAQLNQAEVLLNPGAHLRIEAVKETDQNLHIVAKYT
EEFRAGEIVRNLFDGKTIGIAINQNTSTINESVVTSFDHDDITAMLKPKPLLEENKLGVG
QQVQNRNVQNWYTADVTVIDGGDTRFDGQVIVQMENDPVVAKAAASLAGKHAENSVIVQL
DADGNYRVVYGDPSKLDGKLRWQLVGHGRDHSEHNNTYLSGHSADELAVKLAKFQQTFNQ
AENISSKPDHISIVGCSLVSNDKQKGFGHQFINAMDANGLRVDVSVRSSELAVDEAGRKY
TKDANGDWVQKAESNKVSLSWDAQGEVVTKDQRIRNGIAEGDIDLSRIGVSDVDEPARGA
IGDNNDVFDAPEKRKPETEVIANSSNSNQLSYSGNIQVNVGEGEFTAVNWGTSNVGIKVG
TGGFKSLAFGDNNVMVHLGNGDSRHSANIAGYQAFEGAQMFVGNRNVSFNMGRSNDLLVM
MEKSIPTPPLVNPFDGAARISGVLQNIATSGQGEGWLAAQEQQWTLSGAKKFVKDMSGLD
QSSSVDYTTLVELDSQNERDSRGLKHDAEATLNKQYNQWLSGNGNSGTSQLSRADKLRQA
NEKLAFNFAVGGQGADIQVTTGNWNFMFGDNIQSILDTNLGSLFGLMTQQFTATGQAKTT
FTYTPQDLPRQLKNKLLGKLAGVGADTTLADIFGVDYTASGQIVSRNGQAVDGVAILKEM
LEVIGEFSGDQLQAFIDPAKLLDSLKAGIDMGADGIKSFAETHGLKEKAPEEEKDNSSVS
VNGASANSTQGVADGNAETTETQDRAFGFNSLNLPNLFATIFSQDKQQEMKSLVENLKQN
LTADLLNMKEKTFDFLRNSGHLQGDGDINISLGNYNFNWGGDGKDLGAYLGDNNNFWGGR
GDDVFYATGTSNIFTGGEGNDMGVLMGRENMMFGGEGNDTAVVAGRINHVFLGAGDDQSF
VFGEGSEIDTGTGRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGDDFANVFGNYN
RINAGTGNDVVKLMGYHAVLNGGDGDDHLIAAAISKFSHFDGGDGRDLMVLGGYQNTFKG
GTDVDSFVVSGDVIDNLVEDIRSEDNIVFNGIDWQKLWFERSGYDLKLSILRDPSNDSDQ
AKFEHIGSVTFSDYFNGNRAQVVIAMSEKDLSGEREYTMLSDSAIDALVQAMSGFEPQAG
DNGFIDSLESKSQAAIGMAWSDVVHKKGLMV
Download sequence
Identical sequences WP_000517842.1.71300

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