SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for WP_003512026.1.6636 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  WP_003512026.1.6636
Domain Number 1 Region: 48-687
Classification Level Classification E-value
Superfamily Six-hairpin glycosidases 6.8e-295
Family Cellulases catalytic domain 0.00000000000224
Further Details:      
 
Domain Number 2 Region: 790-938
Classification Level Classification E-value
Superfamily Carbohydrate-binding domain 6.28e-55
Family Cellulose-binding domain family III 0.00000766
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_003512026.1.6636
Sequence length 938
Comment cellulose 1,4-beta-cellobiosidase [Ruminiclostridium thermocellum]; AA=GCF_001692755.1; RF=na; TAX=572545; STAX=1515; NAME=Ruminiclostridium thermocellum DSM 2360; strain=LQRI; AL=Complete Genome; RT=Major
Sequence
MKLRYKVRRRRRIITCCGIIAAVIVVSTLIITIKNSFKPSRQSSNSNVTYSKENVQSVYS
DRFIALFEDIQKQGYLSEEGIPYHSIETLLVEAPDYGHLTTSEAMSYMVWLGATYGKLTG
DWTYFKDAWDKTEQYIIPDPERDQPGVNSYIPTQPAQYAPEADSPEKYPTPGDINAPTGI
DPIADELASTYGTKAIYQMHWLLDVDNWYGYGNHGDGTSRCSYINTYQRGSGESVWETIP
HPSWEDFRWGQVNNGGFLKLFGNFGEPVRQWRYTSASDADARQIQATYWAYLWSKEQGKE
KELQPYFEKAAKMGDYLRYTFFDKYFRPIGVQDSGRAGTGYDSCHYLLSWYASWGGDING
TWSWRIGSSHCHQGYQNPMAAYALAKESIFTPKSKNAKKDWEQSLDRQIELFLYLQSAEG
AIAGGVTNSWSGAYGKYPEGTSTFYDMAYDPHPVYNDPPSNRWFGFQAWSMERIMEYYYL
TGDSRVKELCKKWVSWAIENTRLKSDGTYEIPSTLEWSGQPDPWTGKPSENKNLHCTVTE
WTVDVGVTASYAKALIYYAAATEKHEKKIDDKARETAKQLLDRMWHNYRDKKGVAAKEPR
ADYKRFFDEVYIPHDFSGINAQGAEIKNGITFIDLRPKYKEDKDYKMVEEAIKSGKDPVM
TYHRYWAQAEVAMANAMYHIFFEQKKDGLVPGINSDDSNSSSETQKSETPDYTPDSLSTS
DATITESPANTNSPDENPSPQNTSAPTNVPLNPANTPYNSSNAAPNSPNTPARPSNTTAG
SPAGNNTVGRLILQYANGNGSDTTNTINPRFKLINNSGSPVKLSDVKIRYYYTIDGEKGQ
QFWCDWSSAGNSNVTGKFVKLSSPKNNADYYLEIGFTEGAGSIEPGMSVEVQARFSKDDW
SNYSQANDYSFSASANDYGNSNHIALYISGRLVSGNEP
Download sequence
Identical sequences A3DBI3
203119.Cthe_0071 gi|125972595|ref|YP_001036505.1| gi|385779487|ref|YP_005688652.1| WP_003512026.1.16390 WP_003512026.1.19387 WP_003512026.1.20586 WP_003512026.1.31213 WP_003512026.1.55520 WP_003512026.1.60145 WP_003512026.1.6636 WP_003512026.1.6965

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]