SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for WP_003512300.1.31213 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  WP_003512300.1.31213
Domain Number 1 Region: 26-244
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 2.92e-59
Family Glycosyl hydrolases family 16 0.000000375
Further Details:      
 
Domain Number 2 Region: 269-332
Classification Level Classification E-value
Superfamily Type I dockerin domain 3.04e-17
Family Type I dockerin domain 0.00067
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_003512300.1.31213
Sequence length 334
Comment beta-glucanase [Ruminiclostridium thermocellum]; AA=GCF_000015865.1; RF=representative genome; TAX=203119; STAX=1515; NAME=Ruminiclostridium thermocellum ATCC 27405; strain=ATCC 27405; AL=Complete Genome; RT=Major
Sequence
MKNRVISLLMASLLLVLSVIVAPFYKAEAATVVNTPFVAVFSNFDSSQWEKADWANGSVF
NCVWKPSQVTFSNGKMILTLDREYGGSYPYKSGEYRTKSFFGYGYYEVRMKAAKNVGIVS
SFFTYTGPSDNNPWDEIDIEFLGKDTTKVQFNWYKNGVGGNEYLHNLGFDASQDFHTYGF
EWRPDYIDFYVDGKKVYRGTRNIPVTPGKIMMNLWPGIGVDEWLGRYDGRTPLQAEYEYV
KYYPNGVPQDNPTPTPTIAPSTPTNPNLPLKGDVNGDGHVNSSDYSLFKRYLLRVIDRFP
VGDQSVADVNRDGRIDSTDLTMLKRYLIRAIPSL
Download sequence
Identical sequences A3DBX3
gi|385779352|ref|YP_005688517.1| gi|125972735|ref|YP_001036645.1| WP_003512300.1.16390 WP_003512300.1.19387 WP_003512300.1.20586 WP_003512300.1.31213 WP_003512300.1.55520 WP_003512300.1.60145 WP_003512300.1.6636 WP_003512300.1.6965 203119.Cthe_0211

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]