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Domain assignment for WP_003513660.1.19387 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_003513660.1.19387
Domain Number 1 Region: 26-331
Classification Level Classification E-value
Superfamily Arabinanase/levansucrase/invertase 6.52e-72
Family alpha-L-arabinanase-like 0.0028
Further Details:      
 
Domain Number 2 Region: 322-453
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 2.04e-42
Family Family 6 carbohydrate binding module, CBM6 0.00018
Further Details:      
 
Domain Number 3 Region: 467-532
Classification Level Classification E-value
Superfamily Type I dockerin domain 1.47e-17
Family Type I dockerin domain 0.00045
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_003513660.1.19387
Sequence length 533
Comment carbohydrate-binding protein [Ruminiclostridium thermocellum]; AA=GCF_000184925.1; RF=na; TAX=637887; STAX=1515; NAME=Ruminiclostridium thermocellum DSM 1313; strain=DSM 1313; AL=Complete Genome; RT=Major
Sequence
MRKVLLSLLISTLIITFYIPSCFADNPIVQTIYTADPAPMVYNGVCYVYTTHDEDVLIDN
FFTMNDWRCYSTTDMANWTDHGTVLSYTDFSWSSGKAWAGQCVERNGKFYFYVPLAKKGG
GEAIGVAVSDSPTGPFKDALGKPLIDRGGWGEIDPTVFIDDDGQAYLYWGNPDLYYVKLN
PDMISYSGGIVKVPLTTAGFGQRSKNDRPTSYEEGPWFYKRNNLYYMVFAAGPIPEHIAY
STSTSPTGPWTYRGVIMPTQGGSFTNHPGIIDYKGNSYFFYHNAALPGGSGYHRSVCVEQ
FQYNPDGTIPRINMTKEGPPQIGTLNPYVRTEAETICWSSGIETEKCSEGGMNVGFIENG
DYIKVKGVNFGTGAASFEARVASATNGGNIEIRLDSPTGKLVGTCTVTGTGGWQTWTTKS
CPVSGAEGVHDLYFVFKGGSGYLFNIDWWKFTPANPDPTPTPMPDKRLGDLNNDGKVNST
DFQLLKMHVLRQELPAGTDLSNADVNRDGKVDSSDCTLLKRYILRVISDFPQN
Download sequence
Identical sequences A3DHG9
203119.Cthe_2196 gi|125974681|ref|YP_001038591.1| WP_003513660.1.19387 WP_003513660.1.20586 WP_003513660.1.31213 WP_003513660.1.55520 WP_003513660.1.60145 WP_003513660.1.6636 WP_003513660.1.6965 gi|385780126|ref|YP_005689291.1|

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