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Domain assignment for WP_003513669.1.16390 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_003513669.1.16390
Domain Number 1 Region: 371-515
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 1.84e-31
Family Family 6 carbohydrate binding module, CBM6 0.00045
Further Details:      
 
Domain Number 2 Region: 38-314
Classification Level Classification E-value
Superfamily (Trans)glycosidases 5.49e-26
Family beta-glycanases 0.044
Further Details:      
 
Domain Number 3 Region: 518-651
Classification Level Classification E-value
Superfamily Ricin B-like lectins 7.13e-20
Family Ricin B-like 0.033
Further Details:      
 
Domain Number 4 Region: 884-946
Classification Level Classification E-value
Superfamily Type I dockerin domain 4.84e-16
Family Type I dockerin domain 0.00042
Further Details:      
 
Domain Number 5 Region: 645-735
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000000000778
Family Fibronectin type III 0.0025
Further Details:      
 
Domain Number 6 Region: 753-875
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 0.0000000893
Family Galactose-binding domain 0.046
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_003513669.1.16390
Sequence length 948
Comment carbohydrate-binding protein [Ruminiclostridium thermocellum]; AA=GCF_000493655.1; RF=na; TAX=1349417; STAX=1515; NAME=Ruminiclostridium thermocellum BC1; AL=Contig; RT=Major
Sequence
MGASIKTSIKIRTVAFVSIIAIALSILSFIPNRAYASPQRGRPRLNAARTTFVGDNGQPL
RGPYTSTEWTAAAPYDQIARVKELGFNAVHLYAECFDPRYPAPGSKAPGYAVNEIDKIVE
RTRELGLYLVITIGNGANNGNHNAQWARDFWKFYAPRYAKETHVLYEIHNEPVAWGPPYS
SSTANPPGAVDMEIDVYRIIRTYAPETPVLLFSYAVFGGKGGAAEALKDIRAFNKAVFGN
ENAVWTNEAVAFHGYAGWQETTIAVEELLKAGYPCFMTEYAGGAWGSGMGGLDVELTYEL
ERLGVSWLTFQYIPPTGVSDDVTKPEYFSALVENSGLSWTPDYGNWPAARGVYGNGGLAR
ETATWINNFLTGTTRIEAEDFDWGGNGVSYYDTDSVNVGGQYRPDEGVDIEKTSDTGGGY
NVGWISEGEWLEYTIRVRNPGYYNLSLRVAGISGSRVQVSFGNQDKTGVWELPATGGFQT
WTTATRQVFLGAGLQKLRINALSGGFNLNWIELSPISTGTIPDGTYKFLNRANGKTLQEV
TGNNSIITADYKGITEQHWKIQHIGGGQYRISSAGRGWNWNWWMGFGTVGWWGTGSSTCF
IISPTGDGYYRIVLVGDGTNLQISSGDPSKIEGKAFHGGANQQWAILPVSAPAFPTGLSA
VLDSSGNTANLTWNAAPGANSYNVKRSTKSGGPYTTIATNITSTNYTDTGVATGTKYYYV
VSAVSNGVETLNSAEAILQYPKLTGTVIGTQGSWNNIGNTIHKAFDGDLNTFFDGPTANG
CWLGLDFGEGVRNVITQIKFCPRSGYEQRMIGGIFQGANKEDFSDAVTLFTITSLPGSGT
LTSVDVDNPTGFRYVRYLSPDGSNGNIAELQFFGTPAGEENDDVHLGDINDDGNINSTDL
QMLKRHLLRSIRLTEKQLLNADTNRDGRVDSTDLALLKRYILRVITTL
Download sequence
Identical sequences A3DHG6
WP_003513669.1.16390 WP_003513669.1.31213 WP_003513669.1.60145 gi|125974678|ref|YP_001038588.1| 203119.Cthe_2193

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