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Domain assignment for WP_003514230.1.60145 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_003514230.1.60145
Domain Number 1 Region: 407-707
Classification Level Classification E-value
Superfamily (Trans)glycosidases 1.88e-85
Family beta-glycanases 0.0000296
Further Details:      
 
Weak hits

Sequence:  WP_003514230.1.60145
Domain Number - Region: 707-749
Classification Level Classification E-value
Superfamily Carboxypeptidase regulatory domain-like 0.0051
Family Carboxypeptidase regulatory domain 0.035
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_003514230.1.60145
Sequence length 760
Comment glycoside hydrolase [Ruminiclostridium thermocellum]; AA=GCF_000173015.1; RF=na; TAX=492476; STAX=1515; NAME=Ruminiclostridium thermocellum JW20; strain=JW20; AL=Contig; RT=Major
Sequence
MIVGKVLDMDEKTAIIMTDDFAFLNVVRTSEMAVGKKVKVLDSDIIKPKNSLRRYLPVAA
VAACFVIVLSFVLMFINGNTARKNIYAYVGIDINPSIELWINYNNKIAEAKALNGDAETV
LEGLELKEKTVAEAVNEIVQKSMELGFISREKENIILISTACDLKAGEGSENKDVQNKIG
QLFDDVNKAVSDLKNSGITTRILNLTLEERESSKEENISMGRYAVYLKAKEQNVNLTIDE
IKDADLLELIAKVGIDNENVPEDIVTEDKDNLDAINTGPAESAVPEVTETLPATSTPGRT
EGNTATGSVDSTPALSKNETPGKTETPGRTFNTPAKSSLGQSSTPKPVSPVQTATATKGI
GTLTPRNSPTPVIPSTGIQWIDQANERINEIRKRNVQIKVVDSSNKPIENAYVEAVLTNH
AFGFGTAITRRAMYDSNYTKFIKDHFNWAVFENESKWYTNEPSMGIITYDDADYLYEFCR
SNGIKVRGHCIFWEAEEWQPAWVRSLDPFTLRFAVDNRLNSAVGHFKGKFEHWDVNNEMI
HGNFFKSRLGESIWPYMFNRAREIDPNAKYFVNNNITTLKEADDCVALVNWLRSQGVRVD
GVGVHGHFGDSVDRNLLKGILDKLSVLNLPIWITEYDSVTPDEYRRADNLENLYRTAFSH
PSVEGIVMWGFWERVHWRGRDASIVNDNWTLNEAGRRFESLMNEWTTRAYGSTDGSGSFG
FRGFYGTYRITVTVPGKGKYNYTLNLNRGSGTLQTTYRIP
Download sequence
Identical sequences A3DH97 H6SHY0
gi|385780047|ref|YP_005689212.1| WP_003514230.1.19387 WP_003514230.1.20586 WP_003514230.1.31213 WP_003514230.1.55520 WP_003514230.1.60145 WP_003514230.1.6636 gi|125974609|ref|YP_001038519.1| 203119.Cthe_2119

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