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Domain assignment for WP_003514383.1.16390 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_003514383.1.16390
Domain Number 1 Region: 28-460
Classification Level Classification E-value
Superfamily Six-hairpin glycosidases 1.73e-144
Family Cellulases catalytic domain 0.00000000165
Further Details:      
 
Domain Number 2 Region: 478-622
Classification Level Classification E-value
Superfamily Carbohydrate-binding domain 2.51e-35
Family Cellulose-binding domain family III 0.00018
Further Details:      
 
Domain Number 3 Region: 636-706
Classification Level Classification E-value
Superfamily Type I dockerin domain 1.47e-20
Family Type I dockerin domain 0.00037
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_003514383.1.16390
Sequence length 707
Comment glycoside hydrolase [Ruminiclostridium thermocellum]; AA=GCF_000493655.1; RF=na; TAX=1349417; STAX=1515; NAME=Ruminiclostridium thermocellum BC1; AL=Contig; RT=Major
Sequence
MKKIGILVLITALLAGIIPKSALAEEPKFNYVDAFAKSILFYEANWCGPDAGNNRIKWRG
PCHIEDGKDVGLDLTGGFHDCGDHVKFGLPQCASASTLAWAYYEFSDVFIEKGQDEYMLN
ILKHFCDYFMKCYPEKNKFYYQVGDGDVDHQYWGPPELQSYDRPTYYVATPENPGSDVAG
DTAAALALMYLNYKDRDLEYAEKCLAYAKDIYEFGMTYRGNSKGQSYYLPRDYLDELMWG
SLWLYVATGEQKYMDNLEKLMVEKRIGDEAGNSFNDNWTQCWDYVLTGVFIKLATLTDKP
LYKQIAEDHLDYWQNRIKSTPGGLKYLDSWGVCKYPAAESMVQLVYYKYTGDKRCLDFAK
SQIDYILGDNPKKMSYVVGFGDNYPKFPHHRAASGRLEGPPADETKNDPQRHILYGALVG
GADINDEYYDDIDKYVYSETGLDYNAGLVGALAGMSKYFGQGQMPEDTPGIEGEPPVYYA
DAKIYEENESGITVDLNMYNIVTSPPQYESDLSCRYFVDLSEYAGENIDMSKFVTKVYYS
PAGATISELKPYDKEKNIYYVEISFPNPVYARTYVQFCIYYYENKLWDSSNDFSYQGIGD
TYKTLENIPIYKNGVLVAGKEPSGAGPVEPTPPPKNYVYGDVNGDGKVNSTDCSIVKRYL
LKNIEDFPYEYGKEAGDVNGDGKVNSTDYSLLKRFVLRNIDKFPVEQ
Download sequence
Identical sequences gi|385777726|ref|YP_005686891.1| WP_003514383.1.16390 WP_003514383.1.19387 WP_003514383.1.20586 WP_003514383.1.55520 WP_003514383.1.60145 WP_003514383.1.6636 WP_003514383.1.6965

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