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Domain assignment for WP_003515342.1.55520 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_003515342.1.55520
Domain Number 1 Region: 56-546
Classification Level Classification E-value
Superfamily Six-hairpin glycosidases 1.21e-123
Family Cellulases catalytic domain 0.0000000258
Further Details:      
 
Domain Number 2 Region: 739-889
Classification Level Classification E-value
Superfamily Carbohydrate-binding domain 2.04e-43
Family Cellulose-binding domain family III 0.00019
Further Details:      
 
Domain Number 3 Region: 564-719
Classification Level Classification E-value
Superfamily Carbohydrate-binding domain 3.14e-39
Family Cellulose-binding domain family III 0.00025
Further Details:      
 
Domain Number 4 Region: 895-961
Classification Level Classification E-value
Superfamily Type I dockerin domain 6.87e-17
Family Type I dockerin domain 0.00052
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_003515342.1.55520
Sequence length 961
Comment glycoside hydrolase [Ruminiclostridium thermocellum]; AA=GCF_000255575.1; RF=na; TAX=1094188; STAX=1515; NAME=Ruminiclostridium thermocellum YS; strain=YS; AL=Contig; RT=Major
Sequence
MTDSPQKRILKRKNRCKGIITAVIIAAQLLTSSILFAEAPPATFTPAENWEDYDYFNFAE
ALQKSLYFYDAQKCGVEAGYDHGGRLEWRGACHEVDERIPISNTSLSEAFLAKYRHIIDP
DGDGTVDVHGGFHDAGDHVRFGLPQSYTAGTLGWGFYEFRESFRAIGEEEHMIEILRYFT
DTFLRCSFMDEEGNIVAFCYMVGEGDEDHCYWGPPELYPEEYLRSRPADFATFDDPGSDV
CASTAAALCTSYLNFKDEDPEYAEKCLTVAKALYDFAVKYRGLHKGDGYYTSDYDEDELA
WAAVWLYECTGDMKYINDIVAVDETGNYVGYMKRIIPDTFKQNVWYNSWVHCWDAVWGGT
FIKLNELFPENELFDFIARWNVEYLSGGKCPHEDPNDHNYCKPSPAGYTMINGWGSARYN
AAAQLCALVYMKNNPDRTDFGEWAKSQMEYLMGRNPMGYSYIVGYGYEKGLPFAKHPHHR
AAHGSKTNSMNDPEEHRHILWGALVGGPDLNDYHIDSTTEYAYNEVAVDYNAAFVGALAG
LYKYYGQGHEPIPNFPPLEPETDDYFCEAKIVRETKDSTQVLLRIHNESTRPPHYETGMM
ARYFFNISELIENGQSIDDVIFTIEYDEQISMQQEPVVYRGPFKWDDAGTYYFEFDWSGR
KIYGDRELQISFRVKQDSNYMTHWDSSNDYSRQGLTNEYAISKNVPVYLNGVKVYGEEPP
KLSPTPTPTIDPSQTPDANASISVSYKCGVKDGTKNTIRATINIKNTGTTPVNLSDIKVR
YWFTSDGNEQNNFVCDYAAFGTDKVKGIVKKIENSVPGADTYCEISFTEDAGRLAPGGST
GTIPFRIEGAAEYDQTDDYSYNSEMSDDFGDNTKITAYIKDKLKYGVEPVTIIDITLGDL
NYDGKVNSTDYLVLKRYLLGTIDKESDPNFLKAADLNRDGRVNSTDMSLMKRYLLGIITS
F
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Identical sequences gi|385777725|ref|YP_005686890.1| WP_003515342.1.19387 WP_003515342.1.20586 WP_003515342.1.55520 WP_003515342.1.6636 WP_003515342.1.6965

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