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Domain assignment for WP_003516390.1.6965 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_003516390.1.6965
Domain Number 1 Region: 1-384
Classification Level Classification E-value
Superfamily (Trans)glycosidases 3.73e-86
Family beta-glycanases 0.000000532
Further Details:      
 
Domain Number 2 Region: 602-813
Classification Level Classification E-value
Superfamily SGNH hydrolase 2.29e-21
Family TAP-like 0.091
Further Details:      
 
Domain Number 3 Region: 410-481
Classification Level Classification E-value
Superfamily Type I dockerin domain 7.65e-19
Family Type I dockerin domain 0.00036
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_003516390.1.6965
Sequence length 814
Comment glycoside hydrolase [Ruminiclostridium thermocellum]; AA=GCF_000175715.1; RF=na; TAX=572545; STAX=1515; NAME=Ruminiclostridium thermocellum DSM 2360; strain=DSM 2360; AL=Contig; RT=Major
Sequence
MKKIVSLVCVLVMLVSILGSFSVVAASPVKGFQVSGTKLLDASGNELVMRGMRDISAIDL
VKEIKIGWNLGNTLDAPTETAWGNPRTTKAMIEKVREMGFNAVRVPVTWDTHIGPAPDYK
IDEAWLNRVEEVVNYVLDCGMYAIINVHHDNTWIIPTYANEQRSKEKLVKVWEQIATRFK
DYDDHLLFETMNEPREVGSPMEWMGGTYENRDVINRFNLAVVNTIRASGGNNDKRFILVP
TNAATGLDVALNDLVIPNNDSRVIVSIHAYSPYFFAMDVNGTSYWGSDYDKASLTSELDA
IYNRFVKNGRAVIIGEFGTIDKNNLSSRVAHAEHYAREAVSRGIAVFWWDNGYYNPGDAE
TYALLNRKTLSWYYPEIVQALMRGAGVEPLVSPTPTPTLMPTPSPTVTANILYGDVNGDG
KINSTDCTMLKRYILRGIEEFPSPSGIIAADVNADLKINSTDLVLMKKYLLRSIDKFPAE
DSQTPDEDNPGILYNGRFDFSDPNGPKCAWSGSNVELNFYGTEASVTIKSGGENWFQAIV
DGNPLPPFSVNATTSTVKLVSGLAEGAHHLVLWKRTEASLGEVQFLGFDFGSGKLLAAPK
PLERKIEFIGDSITCAYGNEGTSKEQSFTPKNENSYMSYAAITARNLNASANMIAWSGIG
LTMNYGGAPGPLIMDRYPYTLPYSGVRWDFSKYVPQVVVINLGTNDFSTSFADKTKFVTA
YKNLISEVRRNYPDAHIFCCVGPMLWGTGLDLCRSYVTEVVNDCNRSGDLKVYFVEFRQQ
DGSTGYGEDWHPSIATHQLMAERLTAEIKNKLGW
Download sequence
Identical sequences WP_003516390.1.19387 WP_003516390.1.20586 WP_003516390.1.55520 WP_003516390.1.6636 WP_003516390.1.6965 gi|385778773|ref|YP_005687938.1|

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