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Domain assignment for WP_003517499.1.55520 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_003517499.1.55520
Domain Number 1 Region: 34-338
Classification Level Classification E-value
Superfamily Arabinanase/levansucrase/invertase 8.85e-68
Family alpha-L-arabinanase-like 0.0019
Further Details:      
 
Domain Number 2 Region: 480-606
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 1.5e-37
Family Family 6 carbohydrate binding module, CBM6 0.0000218
Further Details:      
 
Domain Number 3 Region: 335-462
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 1.19e-33
Family Family 6 carbohydrate binding module, CBM6 0.00023
Further Details:      
 
Domain Number 4 Region: 613-678
Classification Level Classification E-value
Superfamily Type I dockerin domain 9.68e-19
Family Type I dockerin domain 0.00027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_003517499.1.55520
Sequence length 679
Comment carbohydrate-binding protein [Ruminiclostridium thermocellum]; AA=GCF_000255575.1; RF=na; TAX=1094188; STAX=1515; NAME=Ruminiclostridium thermocellum YS; strain=YS; AL=Contig; RT=Major
Sequence
MPKKLKKIIKLCSMVFVIGILTLLLPEKGAADYPIFSQRFTADPAAVVYNGRLYIYCSHD
SDATPGQSTYNIPDITCISTDDLKNWTDHGEVFNAKRDSRWASVSWAPSIVYRNNKFYLY
YGNGGNGIGVAVSDSPTGPFKDPLPGPLVSWNTPGVQPAQNMWLFDPGVFVDDDGQAYMY
FGGNGQNNIRVIKLGNDMISTVGSAMTMSAPRFFEAAYMHKYNGKYYFSYASDFSQGASK
IEYMMSDKPTTGFQYKGVILPQPPDNYSNNNHHAIVEYKGNWYVVYHNRTVAKQRGLDPV
YQRNVCIDQMFYNADGTIKQVVPTVDGLKQLKYVDPYTKNLAVTMHKESGIETEECSEGG
RNVAFIENGDWIQVKGVDFGNVGPTSFEARVASATNGGNIEIRLDSPTGTLIGTCKVEGT
GDWQKWVTKTCSVSKVTGVHDLFFRFTGGSGYLFNFSWWKFNSDATPTPTPPPQPSTVPV
TERSAFSKIEVEDFNDIKSSTIQKIGTPNGGSGIGYIENGDWLAYKNIDFGNGATTFKAL
VASTLSPNIELRLDSPTGTLIGTLKVAATGGFNAYEEQSCNISKVTGKHDLYLVFSGAVN
IDWFTFGGSSGIIKRGDTNSDGKINSTDVTALKRHLLRVTQLTGDNLANADVNGDGNVNS
TDLLLLKRYILGEIENFPI
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Identical sequences A3DEX4
gi|125973786|ref|YP_001037696.1| WP_003517499.1.16390 WP_003517499.1.19387 WP_003517499.1.20586 WP_003517499.1.31213 WP_003517499.1.55520 WP_003517499.1.6636 WP_003517499.1.6965 gi|385778341|ref|YP_005687506.1| 203119.Cthe_1271

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