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Domain assignment for WP_003517826.1.60145 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_003517826.1.60145
Domain Number 1 Region: 32-303
Classification Level Classification E-value
Superfamily (Trans)glycosidases 2e-69
Family beta-glycanases 0.0000000000535
Further Details:      
 
Domain Number 2 Region: 321-630
Classification Level Classification E-value
Superfamily (Trans)glycosidases 1.71e-67
Family beta-glycanases 0.00027
Further Details:      
 
Domain Number 3 Region: 659-820
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 7.86e-36
Family CBM11 0.0000000271
Further Details:      
 
Domain Number 4 Region: 827-899
Classification Level Classification E-value
Superfamily Type I dockerin domain 5.79e-16
Family Type I dockerin domain 0.00056
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_003517826.1.60145
Sequence length 900
Comment endoglucanase [Ruminiclostridium thermocellum]; AA=GCF_000173015.1; RF=na; TAX=492476; STAX=1515; NAME=Ruminiclostridium thermocellum JW20; strain=JW20; AL=Contig; RT=Major
Sequence
MKKRLLVSFLVLSIIVGLLSFQSLGNYNSGLKIGAWVGTQPSESAIKSFQELQGRKLDIV
HQFINWSTDFSWVRPYADAVYNNGSILMITWEPWEYNTVDIKNGKADAYITRMAQDMKAY
GKEIWLRPLHEANGDWYPWAIGYSSRVNTNETYIAAFRHIVDIFRANGATNVKWVFNVNC
DNVGNGTSYLGHYPGDNYVDYTSIDGYNWGTTQSWGSQWQSFDQVFSRAYQALASINKPI
IIAEFASAEIGGNKARWITEAYNSIRTSYNKVIAAVWFHENKETDWRINSSPEALAAYRE
AIGAGSSNPTPTPTWTSAPPSSSPKAVDPFEMVRKMGMGTNLGNTLEAPYEGSWSKSAME
YYFDDFKAAGYKNVRIPVRWDNHTMRTYPYTIDKAFLDRVEQVVDWSLSRGFVTIINSHH
DDWIKEDYNGNIERFEKIWEQIAERFKNKSENLLFEIMNEPFGNITDEQIDDMNSRILKI
IRKTNPTRIVIIGGGYWNSYNTLVNIKIPDDPYLIGTFHYYDPYEFTHKWRGTWGTQEDM
DTVVRVFDFVKSWSDRNNIPVYLGEFAVMAYADRTSRVKWYDFISDAALERGFACSVWDN
GVFGSLDNDMAIYNRDTRTFDTEILNALFNPGTYPSYSPKPSPTPRPTKPPVTPAVGEKM
LDDFEGVLNWGSYSGEGAKVSTKIVSGKTGNGMEVSYTGTTDGYWGTVYSLPDGDWSKWL
KISFDIKSVDGSANEIRFMIAEKSINGVGDGEHWVYSITPDSSWKTIEIPFSSFRRRLDY
QPPGQDMSGTLDLDNIDSIHFMYANNKSGKFVVDNIKLIGATSDPTPSIKHGDLNFDNAV
NSTDLLMLKRYILKSLELGTSEQEEKFKKAADLNRDNKVDSTDLTILKRYLLKAISEIPI
Download sequence
Identical sequences gi|385779553|ref|YP_005688718.1| WP_003517826.1.16390 WP_003517826.1.19387 WP_003517826.1.20586 WP_003517826.1.55520 WP_003517826.1.60145 WP_003517826.1.6636 WP_003517826.1.6965

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