SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from Please contact us if you experience any problems.

Domain assignment for WP_003518272.1.55520 from NCBI 2017_08 genome

Domain architecture

Domain assignment details

show help)
Strong hits

Sequence:  WP_003518272.1.55520
Domain Number 1 Region: 13-337
Classification Level Classification E-value
Superfamily (Trans)glycosidases 2.74e-87
Family beta-glycanases 0.0000062
Further Details:      
Domain Number 2 Region: 346-414
Classification Level Classification E-value
Superfamily Type I dockerin domain 7.55e-20
Family Type I dockerin domain 0.00038
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_003518272.1.55520
Sequence length 415
Comment glycosyl hydrolase [Ruminiclostridium thermocellum]; AA=GCF_000255575.1; RF=na; TAX=1094188; STAX=1515; NAME=Ruminiclostridium thermocellum YS; strain=YS; AL=Contig; RT=Major
Download sequence
Identical sequences A3DFA2
gi|125973914|ref|YP_001037824.1| 203119.Cthe_1400 gi|385778204|ref|YP_005687369.1| WP_003518272.1.16390 WP_003518272.1.19387 WP_003518272.1.20586 WP_003518272.1.31213 WP_003518272.1.55520 WP_003518272.1.60145 WP_003518272.1.6636 WP_003518272.1.6965

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]