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Domain assignment for WP_003518272.1.60145 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_003518272.1.60145
Domain Number 1 Region: 13-337
Classification Level Classification E-value
Superfamily (Trans)glycosidases 2.74e-87
Family beta-glycanases 0.0000062
Further Details:      
 
Domain Number 2 Region: 346-414
Classification Level Classification E-value
Superfamily Type I dockerin domain 7.55e-20
Family Type I dockerin domain 0.00038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_003518272.1.60145
Sequence length 415
Comment glycosyl hydrolase [Ruminiclostridium thermocellum]; AA=GCF_000173015.1; RF=na; TAX=492476; STAX=1515; NAME=Ruminiclostridium thermocellum JW20; strain=JW20; AL=Contig; RT=Major
Sequence
MLSKITKLTVIFILILSVTFLSMPKTYTQAAPTFAKGADVSWLPEMEANGYKFYNDDGIE
QDCLQILKDHGIDSIRLRVWVNPPNGYCNKEETIKMALRAKKMGFRIMINFHYSDSWADP
GKQTKPAAWAKYDFNGLMKAVYDYTYDVMSALKANGITPEWVQVGNETNNGMLWEDGKAT
NSMRNFAWLINCGYDAVKAVSPETKVIVHIANGYDNALYRWIFDGITANGARFDVIGMSL
YPTASDWPQLTNQCLNNMKDMISRYGKEIMICEIGMDYWEAQACKDFITDIIQKTKSLPD
NKGLGVFYWEPQCYNWQYYNKGAFDLSGKPTIALDAFLTSDTPDNLIYGDLNGDGRVNST
DYTLLKRYLLGAIQTFPYERGIKAADLNLDGRINSTDYTVLKRYLLNAIPSLPVK
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Identical sequences A3DFA2
gi|125973914|ref|YP_001037824.1| 203119.Cthe_1400 WP_003518272.1.16390 WP_003518272.1.19387 WP_003518272.1.20586 WP_003518272.1.31213 WP_003518272.1.55520 WP_003518272.1.60145 WP_003518272.1.6636 WP_003518272.1.6965 gi|385778204|ref|YP_005687369.1|

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