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Domain assignment for WP_003519072.1.19387 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_003519072.1.19387
Domain Number 1 Region: 39-78,105-518
Classification Level Classification E-value
Superfamily Six-hairpin glycosidases 1.87e-126
Family Cellulases catalytic domain 0.0000000402
Further Details:      
 
Domain Number 2 Region: 546-700
Classification Level Classification E-value
Superfamily Carbohydrate-binding domain 9.94e-29
Family Cellulose-binding domain family III 0.0006
Further Details:      
 
Domain Number 3 Region: 721-788
Classification Level Classification E-value
Superfamily Type I dockerin domain 5.3e-19
Family Type I dockerin domain 0.00034
Further Details:      
 
Weak hits

Sequence:  WP_003519072.1.19387
Domain Number - Region: 87-112
Classification Level Classification E-value
Superfamily EF-hand 0.0427
Family Calmodulin-like 0.047
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_003519072.1.19387
Sequence length 789
Comment glycoside hydrolase [Ruminiclostridium thermocellum]; AA=GCF_000184925.1; RF=na; TAX=637887; STAX=1515; NAME=Ruminiclostridium thermocellum DSM 1313; strain=DSM 1313; AL=Complete Genome; RT=Major
Sequence
MREKKIFSKRTKALIVSFVILALMVFPVGTVNISAANVEYNYAKALQYSIYFYDANMCGT
GVDENGQYNWRGDCHVYDAELPLDSVNTNMSDAFIRENISVLDPDGDGKVDVSGGFHDAG
DHVKFGMPEAYSGSTLGWGYYEFREQYKQTGQDQHIETILRYFNDYFMRCTFRDKDGNVV
AFCYQVGDGDIDHAYWNPPEIDDMFRRGWFATKHLPSTDCVSAAAASLAVNYFNFKDTDP
EYAEKSLDYAKALFDFAQKNDKEVNADGPKGYYTSSKWQDDYCWAAAWLYLATQDDNYLN
ELFKYYDYYAPSCWTHCWNDVWAGTACILAQIDDLYDKDSEEFENRYRQAANKSPYEPID
FWAEVAKLVENWMYGKTVTITPGGYAFLNKWGSARYNTATQFVALVYDKHHGDAPSAYSQ
WARSQMEYLMGNNPLNRCYIVGYSDISVKFPHHRAASGLSKCEDPDPHKYVLYGALVGGP
DENDQHIDMTSDWVYNEVTIDYNAAFVGACAGLYRYFGDPSMEITPNFPPKVEISDPDNG
GSYWVEAFGVDIVQSDGPKATEVTLYVRSDSRKPSKNISVRYFFDATGMSSVDPDKMEIR
QLYDQTAAETDYAAKLTGPHHYKDNIYYVEISWEGFAIANSNKKYQFALGTYTWGNSWDP
TDDWSYQELKIEESNYTGTPARNNRICVYDAGVLVGGIEPDGTTPQSPTPSPTPTPPQEP
EFTYGDLNGDGRVNSSDLALMKRYVVKQIEKLNVPVKAADLNGDDKVNSTDYSVLKRYLL
RSIEVIPIK
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Identical sequences A3DCJ2
gi|385779130|ref|YP_005688295.1| 203119.Cthe_0433 gi|125972954|ref|YP_001036864.1| WP_003519072.1.16390 WP_003519072.1.19387 WP_003519072.1.20586 WP_003519072.1.31213 WP_003519072.1.55520 WP_003519072.1.60145 WP_003519072.1.6636 WP_003519072.1.6965

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