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Domain assignment for WP_003520229.1.6965 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_003520229.1.6965
Domain Number 1 Region: 178-487
Classification Level Classification E-value
Superfamily Arabinanase/levansucrase/invertase 2.69e-73
Family alpha-L-arabinanase-like 0.0014
Further Details:      
 
Domain Number 2 Region: 24-161
Classification Level Classification E-value
Superfamily AbfB domain 1.31e-40
Family AbfB domain 0.00015
Further Details:      
 
Domain Number 3 Region: 509-576
Classification Level Classification E-value
Superfamily Type I dockerin domain 4.97e-18
Family Type I dockerin domain 0.00041
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_003520229.1.6965
Sequence length 580
Comment glycoside hydrolase [Ruminiclostridium thermocellum]; AA=GCF_000175715.1; RF=na; TAX=572545; STAX=1515; NAME=Ruminiclostridium thermocellum DSM 2360; strain=DSM 2360; AL=Contig; RT=Major
Sequence
MILLATSVCYSSNPSITQASTGADGAIAKLQSYNYSHMYIRNANFDVRIDDNVTPETDAQ
WVLVPGLANSGEGYVSIQSVDHLGYYLRHWNYDFRLEKNDGTRIFAEDATFKMVPGLADP
SYTSFQSYNYPTRYIRHYNYLLRLDEIVTALDREDATFRVIDSSSVDPDKADDSVIVTNP
IVRRRADPWVYRHTDGYYYMTASVPEYDRIELRRSRTLQGLSTATPKTIWRRHSSGIMGG
HIWAPEIHFIDGKWYIYFSAGTSTNYFDIRLYVLECSDSNPLTGTWVEKGQLKTNWESFT
LDATTFEHNGTRYLVWAQKDPKIASNSNIYIAKMNGPLAITGNQVMISTPEYSWEKIGYA
VNEGPAVLKKNGKIFITFSASATDANYCMGLLTASDTANLLDPKSWHKSPNPVFQSNPST
GQYGPGHNSFTTSPDGKVDIMVYHARNYRDITGDPLYDPNRHTRAQIVNWNADGTPDFGI
PVADGTNVIYIPPQTPTPIPTNSPTPSDLIYGDINGDNSVNSTDLTILKRYLLGSTVPTA
PNWRLAADLNLDGNINSTDFTILKRYILGRIEAPPWVNQT
Download sequence
Identical sequences A3DHB3
WP_003520229.1.19387 WP_003520229.1.20586 WP_003520229.1.31213 WP_003520229.1.55520 WP_003520229.1.6636 WP_003520229.1.6965 203119.Cthe_2138 gi|125974625|ref|YP_001038535.1| gi|385780062|ref|YP_005689227.1|

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