SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for WP_004162667.1.4043 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  WP_004162667.1.4043
Domain Number 1 Region: 39-292
Classification Level Classification E-value
Superfamily Ribulose-phoshate binding barrel 2.47e-82
Family Tryptophan biosynthesis enzymes 0.0000131
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_004162667.1.4043
Sequence length 296
Comment indole-3-glycerol-phosphate synthase [Microcystis aeruginosa]; AA=GCF_000010625.1; RF=representative genome; TAX=449447; STAX=1126; NAME=Microcystis aeruginosa NIES-843; strain=NIES-843; AL=Complete Genome; RT=Major
Sequence
MQIRRKHPNPAVKVESLSYVVKVPEAQPQNILEEIVWHKEIEVDKLRERLPLLELRQKIA
NTAPPCDFLAALKQGKTQPALIAEVKKASPSKGVILEDFDPVAIARTYEQGGATCLSVLT
DSKFFQGSYENLTLVRQAVSLPLLCKEFILYPYQIYYARSKGADAVLLIAAILSDQDLAY
FVKIVKGLGMTALVEVHSLAEFDRVLAIEGIELIGINNRNLETFTVDLDNTRQLLEARGE
QVREKGILIVSESGLHTATDLAKVKQAGANAVLIGESLVKLPDPALGIQKLFENLG
Download sequence
Identical sequences B0JTM2 I4I3W1
gi|166367244|ref|YP_001659517.1| WP_004162667.1.4043 WP_004162667.1.50331 449447.MAE_45030

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]