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Domain assignment for WP_010871023.1.84152 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  WP_010871023.1.84152
Domain Number - Region: 3-113
Classification Level Classification E-value
Superfamily beta and beta-prime subunits of DNA dependent RNA-polymerase 0.0339
Family RNA-polymerase beta 0.069
Further Details:      
 
Domain Number - Region: 87-147
Classification Level Classification E-value
Superfamily Restriction endonuclease-like 0.0349
Family Hjc-like 0.054
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_010871023.1.84152
Sequence length 230
Comment type II restriction endonuclease MjaV [Methanocaldococcus jannaschii]; AA=GCF_000091665.1; RF=representative genome; TAX=243232; STAX=2190; NAME=Methanocaldococcus jannaschii DSM 2661; strain=DSM 2661; AL=Complete Genome; RT=Major
Sequence
MDDKSYYEEIESILRQILQPIEKISFSTFIRVVSGYKIIPIDLSKKEDKELINDLAKACN
EVIEEIKKTGGVKTKEGKTPKRVNEVGNHIEHYVKDVLNKYGYAITPKTKKGKQKSTGYP
DIEFWYKGKKERDGRVVYIEIKTFNEKNINSSHRTFYASPSKDEEGVKIRYDAPHLCLSF
KIEKLGRDYYATGFKIIDLSKLKGGIKREFNASNRELYKKDLIIYEKDLK
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Identical sequences Q58895
WP_010871023.1.84152 243232.MJ1500 gi|15669694|ref|NP_248507.1|

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