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Domain assignment for WP_011243264.1.5740 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  WP_011243264.1.5740
Domain Number - Region: 2-36
Classification Level Classification E-value
Superfamily Hedgehog/intein (Hint) domain 0.000863
Family Intein (protein splicing domain) 0.006
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_011243264.1.5740
Sequence length 447
Comment MULTISPECIES: trans-splicing intein-formed DNA polymerase III subunit alpha C-terminal partner DnaE-C [Synechococcus]; AA=GCF_000010065.1; RF=representative genome; TAX=269084; STAX=32046; NAME=Synechococcus elongatus PCC 6301; strain=PCC 6301; AL=Complete Genome; RT=Major
Sequence
MVKIVRRRSLGVQPVYDLGVATVHNFVLANGLVASNCFNKSHSTAYGYVTFQTAYLKANF
PVEYMAALLTVNSGNADKVQKYIANCAAMGIEVLPPDINRSGVDFTPTGDRILFGLSAIR
NLGLGAIESILAARDVGGPFLSLADLCDRVDTGSLNRRAMESLIHAGALDVLETGANRQQ
LVADLPLVIDWANSRAKDRASGQGNLFDMLGSNDSNSSPLDTAPKAPAVPDYSPDEKLKL
EKELLGFYLSDHPLKVVQEPARLLAPASISDLEDYCDRGLISTIALLTEVKPVVTKKGDR
MAILRIEDLSGNTEAVVFPRSYERIGHYIEADARLMLWGKVDRRDDQVQFIIEDAEPIDH
VRLVLVELSVEQASDIVQQQRLKELLLQQKREEERSKVPVVAVIQAGSDRYFVRLGAQFR
VEDPEEAVEALQAADFQARAEALLSPA
Download sequence
Identical sequences A0A0H3K7V6 Q31QR7
1140.Synpcc7942_0570 269084.syc0952_d WP_011243264.1.45845 WP_011243264.1.5740 WP_011243264.1.95485 gi|81299381|ref|YP_399589.1| gi|56750961|ref|YP_171662.1|

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