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Domain assignment for WP_011323760.1.57290 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_011323760.1.57290
Domain Number 1 Region: 7-89
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 3.16e-22
Family Transcription factor E/IIe-alpha, N-terminal domain 0.002
Further Details:      
 
Weak hits

Sequence:  WP_011323760.1.57290
Domain Number - Region: 116-147
Classification Level Classification E-value
Superfamily RNA polymerase subunits 0.000732
Family RBP12 subunit of RNA polymerase II 0.033
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_011323760.1.57290
Sequence length 175
Comment transcription factor [Natronomonas pharaonis]; AA=GCF_000026045.1; RF=representative genome; TAX=348780; STAX=2257; NAME=Natronomonas pharaonis DSM 2160; strain=Gabara; AL=Complete Genome; RT=Major
Sequence
MAFEDLLNDPVIQKYLHELVGPTGMPVAAAPPDGEVTDEELAEELGLELNDVRRALFILY
ENDLASYRRLRDEDSGWLTYLWTFQYENIPEQLEEEMHRLLEALENRRQYESENEFYLCG
ECQLRFEFDEAMEFGFECPECGGRLESMENDRLVNAMEQHIEALRDELHVETAEA
Download sequence
Identical sequences Q3IP08
348780.NP4106A gi|76802687|ref|YP_330782.1| WP_011323760.1.57290

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